Factsheet for Zm00001d017755_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30927	Sorghum	cytosol	95.75	95.93
Zm00001d051553_P004	Maize	cytosol	91.31	91.48
Os02t0702600-02	Rice	cytosol	85.03	84.71
TraesCS6B01G298000.1	Wheat	cytosol	84.84	84.53
TraesCS6A01G270900.1	Wheat	cytosol	84.84	84.53
TraesCS6D01G244200.1	Wheat	cytosol	84.84	84.53
HORVU6Hr1G068660.4	Barley	nucleus	73.01	65.29
GSMUA_Achr11P...	Banana	cytosol	39.56	64.07
GSMUA_Achr8P14480_001	Banana	nucleus	29.76	62.16
CDY69871	Canola	cytosol	12.2	58.93
GSMUA_Achr8P14490_001	Banana	cytosol	19.22	54.17
HORVU6Hr1G041610.18	Barley	plastid	73.01	52.67
KRH07751	Soybean	cytosol, nucleus, plastid	52.5	51.17
KRH07240	Soybean	cytosol, nucleus, plastid	51.94	50.54
KRH39757	Soybean	mitochondrion, nucleus	51.94	49.91
KRH76428	Soybean	mitochondrion, nucleus	51.76	49.73
CDY12411	Canola	cytosol	11.83	49.61
GSMUA_Achr11P...	Banana	cytosol	16.45	48.9
CDX84189	Canola	cytosol	44.36	48.88
Solyc08g075120.2.1	Tomato	extracellular	49.91	47.96
CDY31706	Canola	cytosol	44.55	47.91
PGSC0003DMT400053650	Potato	cytosol, nucleus, plastid	49.72	47.78
Bra005323.1-P	Field mustard	nucleus	43.99	47.51
AT1G31650.1	Thale cress	mitochondrion, nucleus	50.28	47.22
CDY62299	Canola	cytosol, nucleus, plastid	48.43	46.79
CDY12303	Canola	nucleus	48.43	46.54
Bra005322.1-P	Field mustard	nucleus	31.98	44.13
PGSC0003DMT400075550	Potato	extracellular	15.9	41.75
Zm00001d021489_P001	Maize	nucleus, plastid	29.02	33.84
Zm00001d053307_P002	Maize	cytosol, plastid	29.94	33.54
Zm00001d002696_P001	Maize	cytosol	28.47	33.33
Zm00001d029850_P001	Maize	nucleus, plastid	29.57	32.72
Solyc12g096220.1.1	Tomato	nucleus	43.81	32.55
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	17.19	32.4
Zm00001d042861_P001	Maize	cytosol	33.83	31.94
Zm00001d021464_P002	Maize	nucleus, plastid	34.01	31.89
Zm00001d006269_P001	Maize	cytosol	22.18	31.25
Zm00001d016001_P002	Maize	mitochondrion	30.68	31.09
VIT_02s0087g00460.t01	Wine grape	mitochondrion, nucleus	52.31	31.03
Zm00001d038989_P002	Maize	nucleus, plastid	28.47	30.2
Zm00001d010062_P001	Maize	peroxisome	31.79	29.81
Zm00001d043383_P001	Maize	nucleus	28.65	29.64
Zm00001d009549_P002	Maize	mitochondrion	28.47	27.9
Zm00001d043889_P001	Maize	mitochondrion	29.57	26.45
Zm00001d047899_P001	Maize	cytosol	12.01	23.38
Zm00001d023356_P001	Maize	cytosol	14.79	22.54
Zm00001d037119_P001	Maize	plastid	17.74	22.27
Zm00001d049679_P001	Maize	plastid	17.38	21.27

Protein Annotations

Gene3D:1.20.58.2010	EntrezGene:100191505	MapMan:27.4.3.1	UniProt:A0A096RFI7	ProteinID:AQK73956.1	ProteinID:AQK73957.1
ProteinID:AQK73960.1	ProteinID:AQK73969.1	GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0065009	InterPro:IPR005512	PFAM:PF03759	InterPro:PRONE_dom
PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF2	InterPro:RopGEF	UniParc:UPI0002214FD7	EnsemblPlantsGene:Zm00001d017755
EnsemblPlants:Zm00001d017755_P002	EnsemblPlants:Zm00001d017755_T002	SEG:seg	:	:	:

Description

Rop guanine nucleotide exchange factor 14

Coordinates

chr5:-:205944885..205951175

Molecular Weight (calculated)

60402.6 Da

IEP (calculated)

6.213

GRAVY (calculated)

-0.273

Length

541 amino acids

Sequence
(BLAST)

001: MRMKTLACCR RRPQDFSIDM DQEPDRVVTY NGLETCIINS STYDDDSGIS ATTGGDGCIT TDSLDDEVSS CSSKDASGSS FTSHSLSKQE EHSLDELGTP
101: MAIHLLPFKG KKTITYTLSA SDIENMKEKF AKLLLGDDTS GGARGVCVAL ALSNGIINLS ATVFGELWKL EPLCEDKKIR WRKEMDWLLS PTTYMVELVP
201: TKQSGADGCT FEIMTPKARS DVHVNLPALQ KLDMMLIEVM DSMIDTEFWY EESGSRADGR GKITGPRKSK KWWLPSPRVP EQGLSQFQRK RLVFQAKLVH
301: QILKAAKSIN EQVLSHMPIP AAVMDALPKS GRASLGEDLY QAITTDYIPV EEIFVSLSLK TEHSVLETIN RLEGAVFAWN QRILEERSKR SPGRHSWSFM
401: KDSSSEVDKM SACIERVDAL VQLLKSRYPN LPPTFIDVLK VQYNVDVGHA IVEAYARVLV GVAFSILSRV AEILLEDDLI KKPNTPMTTL KFDLSSDVYL
501: AGITETPPGH IRRSLMDQIS MVDGRYDAVV GKKKEVKQLR W

Best Arabidopsis Sequence Match ( AT1G31650.1 )
(BLAST)

001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP

Arabidopsis Description

ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.