Factsheet for Zm00001d053307_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84790	Sorghum	cytosol	88.61	97.27
TraesCS6A01G196000.1	Wheat	cytosol	82.82	91.74
TraesCSU01G211800.1	Wheat	cytosol	60.66	89.88
TraesCSU01G217800.1	Wheat	cytosol	61.49	87.35
TraesCSU01G211700.1	Wheat	cytosol	61.49	87.35
Zm00001d016001_P002	Maize	mitochondrion	94.0	85.02
TraesCS6D01G183300.1	Wheat	mitochondrion	88.2	83.69
Os02t0272300-01	Rice	plasma membrane	88.41	83.24
HORVU6Hr1G050860.4	Barley	mitochondrion	86.13	82.7
GSMUA_Achr6P14020_001	Banana	cytosol	60.04	67.29
Solyc07g032730.2.1	Tomato	nucleus	53.83	63.57
GSMUA_Achr3P03410_001	Banana	nucleus	63.35	60.47
Solyc06g066650.2.1	Tomato	nucleus	58.59	60.34
KRH44350	Soybean	nucleus	56.52	60.13
PGSC0003DMT400042632	Potato	nucleus	57.56	59.4
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	33.75	56.79
Solyc03g120650.2.1	Tomato	cytosol	58.39	56.18
PGSC0003DMT400006531	Potato	cytosol	58.18	55.98
Solyc12g044270.1.1	Tomato	nucleus	59.21	54.48
PGSC0003DMT400040374	Potato	nucleus	52.38	53.83
KRH23439	Soybean	nucleus	59.01	53.37
CDY44926	Canola	nucleus	54.45	53.24
Bra020048.1-P	Field mustard	nucleus	54.45	53.24
Zm00001d038989_P002	Maize	nucleus, plastid	55.9	52.94
KRH09881	Soybean	cytosol	58.39	52.91
CDY42277	Canola	nucleus	54.04	52.83
Zm00001d043383_P001	Maize	nucleus	57.14	52.77
CDY58963	Canola	cytosol	40.58	52.69
AT5G19560.4	Thale cress	mitochondrion	55.69	52.54
KRH39304	Soybean	nucleus	56.11	52.12
KRH47282	Soybean	nucleus	57.97	52.04
PGSC0003DMT400097197	Potato	nucleus	59.63	51.15
CDX88884	Canola	cytosol, plastid	51.55	51.02
Bra006510.1-P	Field mustard	cytosol	51.55	51.02
KRH48369	Soybean	mitochondrion	59.01	50.71
CDX92519	Canola	plastid	51.97	50.5
Solyc12g007150.1.1	Tomato	nucleus	57.97	50.45
PGSC0003DMT400001020	Potato	nucleus	57.97	50.45
VIT_11s0016g03740.t01	Wine grape	nucleus	57.14	49.73
CDX70882	Canola	cytosol	51.76	49.51
Bra002246.1-P	Field mustard	plastid	51.97	48.55
Zm00001d009549_P002	Maize	mitochondrion	54.87	48.01
Zm00001d043889_P001	Maize	mitochondrion	53.62	42.81
Zm00001d002696_P001	Maize	cytosol	35.82	37.45
Zm00001d006269_P001	Maize	cytosol	28.78	36.2
Zm00001d029850_P001	Maize	nucleus, plastid	36.65	36.2
Zm00001d021489_P001	Maize	nucleus, plastid	34.16	35.56
Zm00001d021464_P002	Maize	nucleus, plastid	40.79	34.14
Zm00001d042861_P001	Maize	cytosol	40.37	34.03
Zm00001d010062_P001	Maize	peroxisome	39.34	32.93
Zm00001d051553_P004	Maize	cytosol	33.95	30.37
Zm00001d017755_P002	Maize	cytosol	33.54	29.94
Zm00001d047899_P001	Maize	cytosol	15.32	26.62
Zm00001d023356_P001	Maize	cytosol	16.98	23.1
Zm00001d049679_P001	Maize	plastid	20.29	22.17
Zm00001d037119_P001	Maize	plastid	19.67	22.04

Protein Annotations

Gene3D:1.20.58.1310	Gene3D:1.20.58.2010	MapMan:27.4.3.1	ProteinID:AQK59222.1	ProteinID:AQK59223.1	GO:GO:0003674
GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0065009
InterPro:IPR005512	UniProt:K7V529	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101
PANTHER:PTHR33101:SF16	InterPro:RopGEF	UniParc:UPI000221CEFC	EnsemblPlantsGene:Zm00001d053307	EnsemblPlants:Zm00001d053307_P002	EnsemblPlants:Zm00001d053307_T002
SEG:seg	:	:	:	:	:

Description

Rop guanine nucleotide exchange factor 9

Coordinates

chr4:-:225273773..225276743

Molecular Weight (calculated)

53865.3 Da

IEP (calculated)

5.141

GRAVY (calculated)

-0.457

Length

483 amino acids

Sequence
(BLAST)

001: MHESLSNGAG GTPPLPNGRA AAAGAARSRL GRDGPPSELD VMKEKFSKLL LGEDMSGTGK GVPSALALSN AITNLAASVF GEQRKLEPMA PDTKERWKRE
101: VGWLLSVTDL IVEFVPTRQT AENGTTMEIM STAQRRDLAM NIPALRKLDA MLIGYMDNFV DQTEFWYEKG GDNKRDDDKW WMPTVKVPSE GLSDVTRKWL
201: QYQKECVNQV LKAAMAINAQ VLVEMEIPEI YIESLPKKGK TSLGDAIYRS ITEETFDPLE FLAGMDLSTE HKVLDLKNRI EASTVIWKRK MQTKDSKSSW
301: SSIVSFEKRE QFEERAETIL HLLKLQFPGT PQSQLDISKI QYNRDVGYAL LESYSRVLES LAYSVMSRIE DVLSADAAAQ NLTASEAARR ALESTSAELP
401: AARKLDAKEE LEKLNEAPAS MTLFDFMGWH FDQDELMKRR EDGTLDADGE AMLLKKAPSM APKKFSYVDS LSSGGMRSPS ARH

Best Arabidopsis Sequence Match ( AT1G52240.1 )
(BLAST)

001: MVKAMEQEQE TYKSRLFHFK NMNENSASRH VKSWSSDCAM RMDGSDNLDD DDNDMMMFRS QPGKCGSVDR PSLPIGGVTP NRNDKLPRVS SSDSMEALII
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS

Arabidopsis Description

ROPGEF11ROPGEF11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8V0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.