Factsheet for Zm00001d051553_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30927	Sorghum	cytosol	93.7	93.7
Zm00001d017755_P002	Maize	cytosol	91.48	91.31
TraesCS6A01G270900.1	Wheat	cytosol	84.07	83.61
TraesCS6B01G298000.1	Wheat	cytosol	83.7	83.24
TraesCS6D01G244200.1	Wheat	cytosol	83.52	83.06
Os02t0702600-02	Rice	cytosol	82.78	82.32
HORVU6Hr1G068660.4	Barley	nucleus	71.48	63.8
GSMUA_Achr11P...	Banana	cytosol	39.26	63.47
GSMUA_Achr8P14480_001	Banana	nucleus	28.89	60.23
CDY69871	Canola	cytosol	12.04	58.04
GSMUA_Achr8P14490_001	Banana	cytosol	18.89	53.12
HORVU6Hr1G041610.18	Barley	plastid	71.48	51.47
KRH07751	Soybean	cytosol, nucleus, plastid	51.67	50.27
KRH07240	Soybean	cytosol, nucleus, plastid	51.67	50.18
GSMUA_Achr11P...	Banana	cytosol	16.48	48.9
KRH76428	Soybean	mitochondrion, nucleus	50.93	48.85
KRH39757	Soybean	mitochondrion, nucleus	50.93	48.85
CDY12411	Canola	cytosol	11.67	48.84
CDX84189	Canola	cytosol	43.7	48.07
Solyc08g075120.2.1	Tomato	extracellular	49.44	47.42
CDY31706	Canola	cytosol	43.89	47.12
PGSC0003DMT400053650	Potato	cytosol, nucleus, plastid	49.07	47.07
Bra005323.1-P	Field mustard	nucleus	43.33	46.71
AT1G31650.1	Thale cress	mitochondrion, nucleus	49.63	46.53
CDY12303	Canola	nucleus	47.78	45.83
CDY62299	Canola	cytosol, nucleus, plastid	47.41	45.71
Bra005322.1-P	Field mustard	nucleus	31.3	43.11
PGSC0003DMT400075550	Potato	extracellular	16.11	42.23
Zm00001d053307_P002	Maize	cytosol, plastid	30.37	33.95
Zm00001d021489_P001	Maize	nucleus, plastid	28.52	33.19
Zm00001d002696_P001	Maize	cytosol	28.33	33.12
Solyc12g096220.1.1	Tomato	nucleus	44.07	32.69
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	17.22	32.4
Zm00001d029850_P001	Maize	nucleus, plastid	29.26	32.31
Zm00001d021464_P002	Maize	nucleus, plastid	33.89	31.72
Zm00001d006269_P001	Maize	cytosol	22.41	31.51
Zm00001d042861_P001	Maize	cytosol	33.33	31.41
Zm00001d016001_P002	Maize	mitochondrion	30.56	30.9
VIT_02s0087g00460.t01	Wine grape	mitochondrion, nucleus	51.85	30.7
Zm00001d043383_P001	Maize	nucleus	29.07	30.02
Zm00001d038989_P002	Maize	nucleus, plastid	28.15	29.8
Zm00001d010062_P001	Maize	peroxisome	31.3	29.29
Zm00001d009549_P002	Maize	mitochondrion	28.15	27.54
Zm00001d043889_P001	Maize	mitochondrion	29.81	26.61
Zm00001d047899_P001	Maize	cytosol	12.04	23.38
Zm00001d037119_P001	Maize	plastid	17.78	22.27
Zm00001d023356_P001	Maize	cytosol	14.44	21.97
Zm00001d049679_P001	Maize	plastid	17.41	21.27

Protein Annotations

Gene3D:1.20.58.2010	EntrezGene:100280417	MapMan:27.4.3.1	UniProt:A0A1D6Q7Y4	ProteinID:AQK54540.1	GO:GO:0003674
GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0065009
InterPro:IPR005512	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF2
InterPro:RopGEF	UniParc:UPI0004DE9CF1	EnsemblPlantsGene:Zm00001d051553	EnsemblPlants:Zm00001d051553_P004	EnsemblPlants:Zm00001d051553_T004	SEG:seg

Description

Rop guanine nucleotide exchange factor 14

Coordinates

chr4:-:162532578..162537805

Molecular Weight (calculated)

60324.9 Da

IEP (calculated)

6.965

GRAVY (calculated)

-0.228

Length

540 amino acids

Sequence
(BLAST)

001: MKMKALACCR RRPQDLSIDM DQEPDRVMTY NGLETCIINC SAYDDDSGIS ATTCGDGCVT ADSLDDEVSS CFSKDASGSS FSSHCLSKQE EHSLDELGTP
101: IAIHLLPFKA KKPITYTLSA SDIENMKKKF AKLLLGYDTS GGARGVCAAL ALSNGIINLS ATVFGELWKL EPLCEDKKIR WRKEMDWLMS PTTYIVELVP
201: RKQSGADGCT FEIMTPKARS DVHVNLPALQ KLDTMLIEVM DSMIDTEFWY EESGSRADGP VKITGPRKSK KWWLPSPRVP EQGLSRFQRK RLVFQAKLVH
301: QILKAAKSIN EQVLFHMPIP AAVMDALPKS GRASLGEDLY QAITTEYIPI EEIFVSLSLK TEHSVLETMN QLEGAMFAWN QRILEERSKR SPGRHSWSFM
401: KDSSSELDKM SACIERVDTL VQLLKARYPN LPPTFIDVLK VQYNVDVGNA IVEAYSRVLV GVAFSILSRV AEILLEDDLV KRPNTPMASL KFDLSSDVYL
501: AGITETPPGH VRRSLMDQIS MVDGRFNAAV KKKGAKQLRW

Best Arabidopsis Sequence Match ( AT1G31650.1 )
(BLAST)

001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP

Arabidopsis Description

ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.