Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14490_001 | Banana | cytosol | 35.44 | 38.02 |
| GSMUA_Achr11P... | Banana | cytosol | 25.73 | 29.12 |
| Solyc12g096220.1.1 | Tomato | nucleus | 83.01 | 23.49 |
| Bra005322.1-P | Field mustard | nucleus | 42.72 | 22.45 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 61.16 | 22.38 |
| KRH39757 | Soybean | mitochondrion, nucleus | 51.46 | 18.83 |
| KRH76428 | Soybean | mitochondrion, nucleus | 50.49 | 18.47 |
| CDX84189 | Canola | cytosol | 43.69 | 18.33 |
| Bra005323.1-P | Field mustard | nucleus | 43.69 | 17.96 |
| CDY31706 | Canola | cytosol | 43.69 | 17.89 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 47.57 | 17.63 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 47.09 | 17.48 |
| CDY12303 | Canola | nucleus | 47.09 | 17.23 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 45.15 | 16.61 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 45.15 | 16.15 |
| KXG30927 | Sorghum | cytosol | 42.23 | 16.11 |
| Zm00001d051553_P004 | Maize | cytosol | 42.23 | 16.11 |
| Zm00001d017755_P002 | Maize | cytosol | 41.75 | 15.9 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 41.75 | 15.84 |
| Os02t0702600-02 | Rice | cytosol | 41.75 | 15.84 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 41.26 | 15.65 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 40.78 | 15.47 |
| PGSC0003DMT400000136 | Potato | nucleus | 30.1 | 13.0 |
| PGSC0003DMT400067654 | Potato | nucleus | 32.04 | 12.41 |
| PGSC0003DMT400040374 | Potato | nucleus | 28.16 | 12.34 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 53.4 | 12.06 |
| PGSC0003DMT400025800 | Potato | nucleus | 31.07 | 11.66 |
| PGSC0003DMT400042632 | Potato | nucleus | 26.21 | 11.54 |
| PGSC0003DMT400047997 | Potato | nucleus | 31.07 | 11.09 |
| PGSC0003DMT400006531 | Potato | cytosol | 26.7 | 10.96 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 32.04 | 10.91 |
| PGSC0003DMT400001020 | Potato | nucleus | 28.16 | 10.45 |
| PGSC0003DMT400049230 | Potato | nucleus | 32.52 | 9.68 |
| PGSC0003DMT400097197 | Potato | nucleus | 26.21 | 9.59 |
| PGSC0003DMT400005554 | Potato | cytosol, plastid | 30.58 | 9.56 |
| HORVU6Hr1G041610.18 | Barley | plastid | 32.04 | 8.8 |
| CDY69871 | Canola | cytosol | 3.4 | 6.25 |
| CDY12411 | Canola | cytosol | 3.88 | 6.2 |
| GSMUA_Achr11P... | Banana | cytosol | 1.46 | 0.9 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 0.97 | 0.77 |
Protein Annotations
| Gene3D:1.20.58.1310 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 | UniProt:M1CVD0 |
| PFAM:PF03759 | EnsemblPlantsGene:PGSC0003DMG400029379 | PGSC:PGSC0003DMG400029379 | EnsemblPlants:PGSC0003DMT400075550 | InterPro:PRONE_dom | PFscan:PS51334 |
| PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF | SignalP:SignalP-noTM | UniParc:UPI000296E15D | SEG:seg |
Description
Rop guanine nucleotide exchange factor [Source:PGSC_GENE;Acc:PGSC0003DMG400029379]
Coordinates
chr12:+:57974646..57975542
Molecular Weight (calculated)
23089.5 Da
IEP (calculated)
4.618
GRAVY (calculated)
-0.088
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVTHILCFY GVLNLLKLLN LINSFLQSSR TSLGDDLYRI LTAESTSAEE MFNSLNLKSE NNVVEVVNRL EGSILAWKER ITDQASGKSP ARRSWSFGKD
101: PISELDKLEV LLSQAEALVQ QLKFEYPNLP QTFLNVTKIQ SGTDIGHLIM EAYSRVLLNL AYNILTRVGE VLQVDFSSNL NSPAATVYSS PISSDETLVY
201: RSDEQS
101: PISELDKLEV LLSQAEALVQ QLKFEYPNLP QTFLNVTKIQ SGTDIGHLIM EAYSRVLLNL AYNILTRVGE VLQVDFSSNL NSPAATVYSS PISSDETLVY
201: RSDEQS
001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.