Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12303 | Canola | nucleus | 96.61 | 96.09 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 88.21 | 85.76 |
| CDY69871 | Canola | cytosol | 15.36 | 76.79 |
| CDY12411 | Canola | cytosol | 17.32 | 75.19 |
| CDY31706 | Canola | cytosol | 61.96 | 68.99 |
| CDX84189 | Canola | cytosol | 60.18 | 68.64 |
| KRH76428 | Soybean | mitochondrion, nucleus | 61.07 | 60.75 |
| KRH39757 | Soybean | mitochondrion, nucleus | 60.54 | 60.21 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 57.68 | 58.2 |
| Solyc08g075120.2.1 | Tomato | extracellular | 58.39 | 58.08 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 57.86 | 57.55 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 56.43 | 56.83 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 26.07 | 56.37 |
| GSMUA_Achr11P... | Banana | cytosol | 33.21 | 55.69 |
| Os02t0702600-02 | Rice | cytosol | 47.14 | 48.62 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 46.96 | 48.43 |
| Zm00001d017755_P002 | Maize | cytosol | 46.79 | 48.43 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 46.79 | 48.25 |
| KXG30927 | Sorghum | cytosol | 46.43 | 48.15 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 46.61 | 48.07 |
| Zm00001d051553_P004 | Maize | cytosol | 45.71 | 47.41 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 15.54 | 45.31 |
| PGSC0003DMT400075550 | Potato | extracellular | 16.61 | 45.15 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 43.39 | 40.17 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 5.18 | 38.67 |
| GSMUA_Achr11P... | Banana | cytosol | 12.5 | 38.46 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 60.89 | 37.39 |
| Solyc12g096220.1.1 | Tomato | nucleus | 48.39 | 37.23 |
| CDX67930 | Canola | nucleus | 30.0 | 34.5 |
| CDY18892 | Canola | nucleus | 27.68 | 34.29 |
| CDX74772 | Canola | nucleus, plastid | 27.5 | 34.22 |
| CDY70620 | Canola | nucleus | 28.21 | 33.69 |
| CDY44926 | Canola | nucleus | 29.46 | 33.4 |
| CDX92519 | Canola | plastid | 29.46 | 33.2 |
| CDY42277 | Canola | nucleus | 29.29 | 33.2 |
| CDX88884 | Canola | cytosol, plastid | 28.93 | 33.2 |
| CDY46477 | Canola | nucleus | 30.71 | 33.01 |
| CDY07216 | Canola | cytosol | 27.86 | 32.84 |
| CDX77402 | Canola | nucleus | 30.54 | 32.82 |
| CDY39783 | Canola | mitochondrion | 30.71 | 32.76 |
| CDY03297 | Canola | mitochondrion | 30.54 | 32.7 |
| HORVU6Hr1G041610.18 | Barley | plastid | 43.39 | 32.4 |
| CDY51157 | Canola | nucleus | 26.25 | 32.31 |
| CDX70882 | Canola | cytosol | 28.75 | 31.88 |
| CDX97723 | Canola | nucleus | 30.18 | 31.77 |
| CDY58963 | Canola | cytosol | 20.89 | 31.45 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 30.0 | 31.28 |
| CDY03296 | Canola | nucleus | 18.39 | 31.12 |
| CDY45633 | Canola | nucleus | 28.93 | 30.98 |
| CDY30136 | Canola | nucleus | 30.36 | 30.91 |
| CDX77457 | Canola | cytosol | 29.64 | 30.35 |
| CDX85176 | Canola | cytosol | 29.29 | 29.98 |
| CDY10476 | Canola | nucleus | 29.64 | 29.64 |
| CDY40325 | Canola | nucleus | 29.46 | 29.46 |
| CDX87879 | Canola | nucleus | 29.11 | 29.26 |
| CDY40246 | Canola | cytosol, plastid | 28.57 | 28.73 |
| CDY41197 | Canola | cytosol, plastid | 28.39 | 28.7 |
| CDY28381 | Canola | nucleus | 30.0 | 28.05 |
| CDY20181 | Canola | nucleus | 30.0 | 27.68 |
| CDY67259 | Canola | nucleus | 29.46 | 27.45 |
| CDY52982 | Canola | nucleus | 29.46 | 27.45 |
| CDX70109 | Canola | cytosol | 29.64 | 26.22 |
| CDX98888 | Canola | cytosol | 29.64 | 26.02 |
| CDX93028 | Canola | nucleus | 20.89 | 24.68 |
| CDX91908 | Canola | cytosol | 27.86 | 23.82 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078JCG7 | UniProt:A0A078JCG7 | EnsemblPlants:CDY62299 | ProteinID:CDY62299 |
| ProteinID:CDY62299.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00036148001 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF | UniParc:UPI0004EF21B2 | SEG:seg |
Description
BnaA09g54200DBnaA09g54200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCG7]
Coordinates
chrLK034128:+:575..4832
Molecular Weight (calculated)
62506.2 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.502
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLVRRRLGC CSRDREISID FDEQDRMITY DGLEACIINN QSYEEEEESG TNGCLTESLD DDAFSSCSSS KEASSSFSSK WLPTKTEERS CDGLNLPGRS
101: KHFDGKEKPS SNVYCHLDVE AMKEKFSKLL LGEDVTGGCK GIQVALALSN AVTHLANSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPTKQT
201: DANGISIEIM TPKARADIHM NLPALQKLDS MLIEILDSMV NTEFWYSETG SRAEGTNKTT SESKRWWLPS PQVPKPGLSN SARKKLLDKG KVVYQVFKAT
301: KSINENVLLE MPVPSVIKEA IPKSGKNSLG DELYKMLVAE SATVDEILVS LKLGTEHTAL ETVNKLESAI FAWKERITEQ ESNSKSPVRT PWSFAKDPLS
401: DTVRNELLLN RAEALRSQIK SKHPNLPQSF LDATKIQYGK DIGHAVLEAY SRTLANLAYR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DLYRTPERPL
501: LSSRVRHSLT DDMNKADGTE TATSLDLLFA DAKVSSVNAT TPSRSSRIWC MSKVPPDASP
101: KHFDGKEKPS SNVYCHLDVE AMKEKFSKLL LGEDVTGGCK GIQVALALSN AVTHLANSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPTKQT
201: DANGISIEIM TPKARADIHM NLPALQKLDS MLIEILDSMV NTEFWYSETG SRAEGTNKTT SESKRWWLPS PQVPKPGLSN SARKKLLDKG KVVYQVFKAT
301: KSINENVLLE MPVPSVIKEA IPKSGKNSLG DELYKMLVAE SATVDEILVS LKLGTEHTAL ETVNKLESAI FAWKERITEQ ESNSKSPVRT PWSFAKDPLS
401: DTVRNELLLN RAEALRSQIK SKHPNLPQSF LDATKIQYGK DIGHAVLEAY SRTLANLAYR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DLYRTPERPL
501: LSSRVRHSLT DDMNKADGTE TATSLDLLFA DAKVSSVNAT TPSRSSRIWC MSKVPPDASP
001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.