Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40246 | Canola | cytosol, plastid | 98.01 | 97.49 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 89.89 | 86.01 |
| GSMUA_Achr9P03750_001 | Banana | cytosol | 47.11 | 56.01 |
| PGSC0003DMT400067654 | Potato | nucleus | 51.99 | 54.14 |
| Solyc08g006550.2.1 | Tomato | nucleus | 51.44 | 53.77 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 7.04 | 52.0 |
| KRH73109 | Soybean | nucleus | 50.9 | 50.63 |
| VIT_13s0019g02710.t01 | Wine grape | nucleus | 54.33 | 50.5 |
| EES03886 | Sorghum | cytosol | 48.92 | 49.72 |
| Os01t0849100-01 | Rice | cytosol | 48.92 | 49.63 |
| KRG97804 | Soybean | nucleus | 53.07 | 49.58 |
| KRH31060 | Soybean | nucleus | 53.25 | 49.33 |
| TraesCS3B01G396500.1 | Wheat | cytosol | 47.65 | 48.98 |
| TraesCS3D01G357800.1 | Wheat | cytosol | 47.29 | 48.7 |
| TraesCS3A01G364400.1 | Wheat | nucleus | 47.47 | 48.61 |
| KRH15022 | Soybean | nucleus | 48.92 | 48.31 |
| CDY69871 | Canola | cytosol | 9.75 | 48.21 |
| CDY10476 | Canola | nucleus | 48.19 | 47.68 |
| CDY40325 | Canola | nucleus | 48.01 | 47.5 |
| Zm00001d042861_P001 | Maize | cytosol | 48.38 | 46.77 |
| TraesCS1D01G280000.1 | Wheat | cytosol | 46.93 | 46.51 |
| Os05t0454200-01 | Rice | nucleus | 47.11 | 45.95 |
| TraesCS1B01G289900.1 | Wheat | cytosol | 46.93 | 45.94 |
| HORVU1Hr1G072910.3 | Barley | cytosol | 46.39 | 45.57 |
| CDX70109 | Canola | cytosol | 51.44 | 45.02 |
| EES18335 | Sorghum | cytosol | 47.47 | 44.88 |
| Zm00001d010062_P001 | Maize | peroxisome | 46.57 | 44.71 |
| CDX98888 | Canola | cytosol | 51.44 | 44.67 |
| CDY07216 | Canola | cytosol | 38.09 | 44.42 |
| CDY70620 | Canola | nucleus | 37.55 | 44.35 |
| CDY51157 | Canola | nucleus | 36.1 | 43.96 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 46.39 | 43.63 |
| CDY18892 | Canola | nucleus | 34.48 | 42.26 |
| CDX74772 | Canola | nucleus, plastid | 34.3 | 42.22 |
| CDX77457 | Canola | cytosol | 41.52 | 42.05 |
| CDX85176 | Canola | cytosol | 41.34 | 41.86 |
| HORVU3Hr1G085680.2 | Barley | plastid | 47.65 | 40.43 |
| CDX67930 | Canola | nucleus | 33.75 | 38.4 |
| CDY44926 | Canola | nucleus | 34.12 | 38.26 |
| CDY03296 | Canola | nucleus | 22.74 | 38.07 |
| CDY03297 | Canola | mitochondrion | 35.74 | 37.86 |
| CDY42277 | Canola | nucleus | 33.75 | 37.85 |
| CDY39783 | Canola | mitochondrion | 35.74 | 37.71 |
| CDX77402 | Canola | nucleus | 34.84 | 37.04 |
| CDY46477 | Canola | nucleus | 34.84 | 37.04 |
| CDY45633 | Canola | nucleus | 34.66 | 36.71 |
| CDX92519 | Canola | plastid | 32.85 | 36.62 |
| CDX88884 | Canola | cytosol, plastid | 31.95 | 36.27 |
| CDY58963 | Canola | cytosol | 24.01 | 35.75 |
| CDX70882 | Canola | cytosol | 32.13 | 35.25 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.94 | 35.01 |
| CDX87879 | Canola | nucleus | 34.66 | 34.47 |
| CDX97723 | Canola | nucleus | 33.03 | 34.4 |
| CDY12411 | Canola | cytosol | 7.94 | 34.11 |
| CDY30136 | Canola | nucleus | 33.21 | 33.45 |
| Zm00001d047899_P001 | Maize | cytosol | 16.61 | 33.09 |
| CDX84189 | Canola | cytosol | 29.06 | 32.79 |
| CDX91908 | Canola | cytosol | 37.91 | 32.06 |
| CDY67259 | Canola | nucleus | 34.3 | 31.61 |
| CDY52982 | Canola | nucleus | 34.12 | 31.45 |
| CDY31706 | Canola | cytosol | 28.52 | 31.41 |
| CDY28381 | Canola | nucleus | 33.57 | 31.05 |
| CDY20181 | Canola | nucleus | 33.57 | 30.64 |
| Zm00001d023356_P001 | Maize | cytosol | 19.31 | 30.14 |
| Zm00001d037119_P001 | Maize | plastid | 22.38 | 28.77 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 28.7 | 28.39 |
| CDY12303 | Canola | nucleus | 28.7 | 28.24 |
| Zm00001d049679_P001 | Maize | plastid | 22.02 | 27.6 |
| CDX93028 | Canola | nucleus | 22.56 | 26.37 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 45.85 | 19.13 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078HTL4 | UniProt:A0A078HTL4 | EnsemblPlants:CDY41197 |
| ProteinID:CDY41197 | ProteinID:CDY41197.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00072606001 | InterPro:IPR005512 | PFAM:PF03759 |
| InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF1 | InterPro:RopGEF | UniParc:UPI0004EE40EF |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g26610DBnaC08g26610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTL4]
Coordinates
chrLK032493:+:1641..4461
Molecular Weight (calculated)
61503.2 Da
IEP (calculated)
8.724
GRAVY (calculated)
-0.406
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSCIGSEG SKRYGESKRI VADSVTESTT DSSLSSSSCG AGSSSGRSVS SQSSPPTKSQ LLGWPLGQGS WRKSSGKKMT KKTPTKVDTF GFKRIGTETS
101: EVELLKERMA KLLLGEDMSG SGEGVCPALA ISNAITNLYA AILGQQWRLE PLPSEKKTMW RREVEVLLSV SDHIVELVPS FQNIPNGSKI EVMNCRPRSD
201: LSTCLPALRK LDNMLIEILD SFDGTEFWYV DQGVVASESA RSNSFREDGD KWWLPLPRVP SDGLSEQTRK KLDHTRDFTN QILKACMSIN SIALADMEVP
301: QAYLEALPKN GRSCLGDFLY RNITSDNFSA DYLLESIDLS SEHAVVEMAN RVEASMYIWR RRAHSRHLIS LYRSTGAKPT WGMIVREMMM NQNDGDKRQI
401: FAVRAESLLI SLKQRFPGLR QTALDTSKIQ FNKDVGKSIL ESYSRVLESL AYSIGVRIEE VLYMDDISKE DHDDSCSLRK RLSVPSLFSV SFSGTSTPYR
501: TPSFSASTPT YSPMPLISPI SGGGGERAPF LSRRNIRERC GFGPKKALAN YLRG
101: EVELLKERMA KLLLGEDMSG SGEGVCPALA ISNAITNLYA AILGQQWRLE PLPSEKKTMW RREVEVLLSV SDHIVELVPS FQNIPNGSKI EVMNCRPRSD
201: LSTCLPALRK LDNMLIEILD SFDGTEFWYV DQGVVASESA RSNSFREDGD KWWLPLPRVP SDGLSEQTRK KLDHTRDFTN QILKACMSIN SIALADMEVP
301: QAYLEALPKN GRSCLGDFLY RNITSDNFSA DYLLESIDLS SEHAVVEMAN RVEASMYIWR RRAHSRHLIS LYRSTGAKPT WGMIVREMMM NQNDGDKRQI
401: FAVRAESLLI SLKQRFPGLR QTALDTSKIQ FNKDVGKSIL ESYSRVLESL AYSIGVRIEE VLYMDDISKE DHDDSCSLRK RLSVPSLFSV SFSGTSTPYR
501: TPSFSASTPT YSPMPLISPI SGGGGERAPF LSRRNIRERC GFGPKKALAN YLRG
001: MEDNSCIGFE GSKRFGETSK RIIGLIDSVT ESTTDSSLSS SSSGVGSSSG RSSVAERSVS SPPTKSQILG WPLGQGSWRK SSGKMKKKTP TKIDDFGFKR
101: VGTETSEIEL LKERMAKLLL GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI VELVPSFQNF PNGNKIEVMN
201: CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301: AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD
401: KREIFAERAE SLLIRLKQRF PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD DSCSDKLRLL SKEAASGGSG
501: SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
101: VGTETSEIEL LKERMAKLLL GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI VELVPSFQNF PNGNKIEVMN
201: CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301: AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD
401: KREIFAERAE SLLIRLKQRF PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD DSCSDKLRLL SKEAASGGSG
501: SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
Arabidopsis Description
ROPGEF6Rop guanine nucleotide exchange factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M056]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.