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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G396500.1 Wheat cytosol 96.86 97.22
TraesCS3D01G357800.1 Wheat cytosol 95.93 96.47
Os01t0849100-01 Rice cytosol 81.33 80.59
EES03886 Sorghum cytosol 80.78 80.18
HORVU3Hr1G085680.2 Barley plastid 92.79 76.88
Zm00001d042861_P001 Maize cytosol 78.93 74.52
GSMUA_Achr9P03750_001 Banana cytosol 56.75 65.88
TraesCS1A01G280900.2 Wheat cytosol 68.39 62.82
PGSC0003DMT400067654 Potato nucleus 58.04 59.02
Solyc08g006550.2.1 Tomato nucleus 57.49 58.68
AT5G02010.1 Thale cress nucleus 54.9 54.4
VIT_13s0019g02710.t01 Wine grape nucleus 59.33 53.86
CDY10476 Canola nucleus 55.45 53.57
VIT_08s0007g01380.t01 Wine grape nucleus 60.26 53.53
CDY40325 Canola nucleus 55.27 53.39
Bra009621.1-P Field mustard nucleus 55.27 53.39
KRH73109 Soybean nucleus 54.16 52.6
TraesCS5A01G340900.1 Wheat cytosol 45.29 51.26
KRH00070 Soybean nucleus 58.04 51.22
Solyc09g011480.2.1 Tomato nucleus 55.64 51.19
KRH31060 Soybean nucleus 55.27 50.0
KRG97804 Soybean nucleus 54.71 49.92
Bra009152.1-P Field mustard cytosol, plastid 54.34 49.41
KRH15022 Soybean nucleus 50.65 48.84
KRH75747 Soybean nucleus 52.68 48.72
KRH65969 Soybean nucleus 54.16 48.51
AT5G05940.1 Thale cress cytosol 54.34 48.12
TraesCS2A01G408100.1 Wheat cytosol 41.59 48.08
CDY41197 Canola cytosol, plastid 48.61 47.47
CDY40246 Canola cytosol, plastid 48.61 47.22
Solyc10g086660.1.1 Tomato nucleus 58.78 46.83
TraesCS6A01G405000.1 Wheat nucleus 39.56 46.83
TraesCS1A01G208700.1 Wheat nucleus 41.22 46.75
AT3G55660.1 Thale cress cytosol, plastid 49.72 46.46
CDX70109 Canola cytosol 54.34 46.45
PGSC0003DMT400049230 Potato nucleus 59.33 46.39
CDX98888 Canola cytosol 54.53 46.24
Bra007183.1-P Field mustard cytosol, plastid 48.61 46.06
PGSC0003DMT400005554 Potato cytosol, plastid 55.82 45.83
Zm00001d047899_P001 Maize cytosol 22.92 44.6
KRH49210 Soybean nucleus, plastid 58.23 44.06
TraesCS6A01G196000.1 Wheat cytosol 34.94 43.35
VIT_08s0007g01390.t01 Wine grape nucleus 47.32 43.03
Zm00001d023356_P001 Maize cytosol 25.69 39.15
TraesCS3A01G305500.1 Wheat cytosol, mitochondrion, nucleus, plastid 34.01 39.15
Zm00001d037119_P001 Maize plastid 29.94 37.59
Zm00001d049679_P001 Maize plastid 29.39 35.97
TraesCS1A01G392100.1 Wheat plastid 36.41 35.12
TraesCS6A01G270900.1 Wheat cytosol 33.64 33.52
TraesCS3A01G270400.1 Wheat plastid 36.97 31.8
GSMUA_Achr6P14950_001 Banana mitochondrion 52.87 21.54
Protein Annotations
EnsemblPlants:TraesCS3A01G364400.1EnsemblPlantsGene:TraesCS3A01G364400Gene3D:1.20.58.1310Gene3D:1.20.58.2010GO:GO:0003674GO:GO:0005089
GO:GO:0005488GO:GO:0005515InterPro:IPR005512InterPro:PRONE_domInterPro:RopGEFPANTHER:PTHR33101
PANTHER:PTHR33101:SF1PFAM:PF03759PFscan:PS51334SEG:segMapMan:27.4.3.1:
Description
No Description!
Coordinates
chr3A:-:613172717..613175858
Molecular Weight (calculated)
59275.7 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.318
Length
541 amino acids
Sequence
(BLAST)
001: MGSGEEERGG VSEAAFTDSA DGSSSSSDAA STDDWPALAL AAPKKAPPCS GAPDAEMAGK LKRRGGPETE MMKERFAKLL LGEDMSGSGK GVCTALAIAN
101: AITNLCATIF GQLWRLEPLP PEKAAMWRRE MDWLLCISDH IVELVPTWQS FPDGTRLEIM TSRPRSDLYI NLPALRKLDH MLLEILDSFR DTEFWYVDQG
201: ICAADCDGSA SFRAAFHRRD DKWWLPVPRV PPGGLRDKTR KQLQHKRDCA NQILKAAMAI NSNALAEMDV PESYLDSLPK NGRATLGDVI YRYITSDHFS
301: PECLLDSLDL STEYQALEIA SRVEASVHVW RRRVPAKPAN GLGRTASASA RSWSMVRDML MDSEKRELLA ERAEGLLICL KQRFPALTQT SLDMSKIQYN
401: KDVGKSILES YSRVLESLAS NIVARIDDLL NIDELNRHVE QLSSGEADLK MACGRAVVPP YQQVPAPGTP FVTSYATPSF SPGRLSSPRT SVGAGRRSQG
501: NRAAAAAAKK ALTDHLGPSE VRGMIIVNRS TMVDVSTTTD L
Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)
001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
Arabidopsis Description
ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.