Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG97804 | Soybean | nucleus | 94.82 | 95.62 |
KRH73109 | Soybean | nucleus | 73.91 | 79.35 |
KRH15022 | Soybean | nucleus | 70.74 | 75.4 |
PGSC0003DMT400067654 | Potato | nucleus | 62.21 | 69.92 |
Solyc08g006550.2.1 | Tomato | nucleus | 61.2 | 69.06 |
GSMUA_Achr9P03750_001 | Banana | cytosol | 53.68 | 68.88 |
VIT_13s0019g02710.t01 | Wine grape | nucleus | 68.39 | 68.62 |
Bra009152.1-P | Field mustard | cytosol, plastid | 58.19 | 58.49 |
EES03886 | Sorghum | cytosol | 52.84 | 57.98 |
Os01t0849100-01 | Rice | cytosol | 51.67 | 56.59 |
KRH15734 | Soybean | cytosol | 24.41 | 56.15 |
AT5G05940.1 | Thale cress | cytosol | 57.36 | 56.14 |
CDX70109 | Canola | cytosol | 58.53 | 55.29 |
TraesCS3B01G396500.1 | Wheat | cytosol | 49.83 | 55.29 |
TraesCS3A01G364400.1 | Wheat | nucleus | 50.0 | 55.27 |
TraesCS3D01G357800.1 | Wheat | cytosol | 49.5 | 55.02 |
Os05t0454200-01 | Rice | nucleus | 52.17 | 54.93 |
TraesCS1D01G280000.1 | Wheat | cytosol | 51.17 | 54.74 |
CDX98888 | Canola | cytosol | 58.19 | 54.55 |
KRH00070 | Soybean | nucleus | 55.85 | 54.49 |
Zm00001d042861_P001 | Maize | cytosol | 51.84 | 54.1 |
KRH65969 | Soybean | nucleus | 54.52 | 53.97 |
HORVU1Hr1G072910.3 | Barley | cytosol | 50.84 | 53.9 |
TraesCS1B01G289900.1 | Wheat | cytosol | 51.0 | 53.89 |
CDY41197 | Canola | cytosol, plastid | 49.33 | 53.25 |
KRH75747 | Soybean | nucleus | 51.67 | 52.82 |
EES18335 | Sorghum | cytosol | 51.67 | 52.73 |
CDY40246 | Canola | cytosol, plastid | 49.0 | 52.6 |
Zm00001d010062_P001 | Maize | peroxisome | 50.33 | 52.17 |
KRH65102 | Soybean | nucleus | 41.3 | 51.35 |
Bra007183.1-P | Field mustard | cytosol, plastid | 49.0 | 51.31 |
TraesCS1A01G280900.2 | Wheat | cytosol | 50.33 | 51.1 |
AT3G55660.1 | Thale cress | cytosol, plastid | 49.33 | 50.95 |
KRH48179 | Soybean | nucleus | 31.44 | 50.13 |
KRH24128 | Soybean | cytosol | 45.99 | 48.42 |
KRH29101 | Soybean | cytosol, plastid | 45.65 | 48.23 |
KRG94270 | Soybean | mitochondrion | 8.86 | 47.75 |
KRH00737 | Soybean | nucleus, plastid | 40.8 | 47.66 |
KRH40457 | Soybean | cytosol | 39.8 | 46.48 |
KRH49210 | Soybean | nucleus, plastid | 55.35 | 46.29 |
HORVU3Hr1G085680.2 | Barley | plastid | 50.0 | 45.79 |
KRH44350 | Soybean | nucleus | 34.11 | 44.93 |
KRH39304 | Soybean | nucleus | 35.12 | 40.38 |
KRH09881 | Soybean | cytosol | 35.95 | 40.34 |
KRH23439 | Soybean | nucleus | 35.79 | 40.07 |
KRH47282 | Soybean | nucleus | 35.79 | 39.78 |
KRH48369 | Soybean | mitochondrion | 35.62 | 37.9 |
Zm00001d047899_P001 | Maize | cytosol | 17.06 | 36.69 |
KRH07240 | Soybean | cytosol, nucleus, plastid | 33.11 | 35.61 |
KRH07751 | Soybean | cytosol, nucleus, plastid | 32.44 | 34.95 |
KRH39757 | Soybean | mitochondrion, nucleus | 32.78 | 34.81 |
KRH76428 | Soybean | mitochondrion, nucleus | 32.61 | 34.64 |
Zm00001d037119_P001 | Maize | plastid | 24.41 | 33.87 |
Zm00001d023356_P001 | Maize | cytosol | 19.57 | 32.96 |
Zm00001d049679_P001 | Maize | plastid | 24.25 | 32.81 |
GSMUA_Achr6P14950_001 | Banana | mitochondrion | 51.67 | 23.27 |
Protein Annotations
Gene3D:1.20.58.2010 | EntrezGene:100780972 | MapMan:27.4.3.1 | EMBL:ACUP02007119 | EnsemblPlantsGene:GLYMA_11G225200 | GO:GO:0003674 |
GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 |
InterPro:IPR005512 | UniProt:K7LRN0 | EnsemblPlants:KRH31060 | ProteinID:KRH31060 | ProteinID:KRH31060.1 | PFAM:PF03759 |
InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF1 | InterPro:RopGEF | UniParc:UPI000233D142 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:31998143..32001822
Molecular Weight (calculated)
66882.6 Da
IEP (calculated)
8.631
GRAVY (calculated)
-0.459
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALSKKNEN SSQKKSDGVV LSCLTTDYSS SDTSFCGSSS SVSTDEAKAK GSSSPAPLGW PILKATISKR SSSDEKENRH KSHLEDKKFT SIGLKLSELD
101: MMKERFAKLL LGEDMSGSGK GVCTALAISN AITNLCATVF GQLWRLEPLP SEKKEMWQRE MEWLVSVSDY IVELMPSWQT YPDGSKLEVM TCRPRADIFI
201: NLPALRKLDN MLLEILDSFT ATEFWYVDQG IVAPDADGSA SFRRTIQRQE EKWWLPVPRV PPAGLSEDSR KQLNHSRECA NQILKAAMAI NSIALAEMEV
301: PESYLEVLPK NGRTCLGDFV YRYITSDQFS PECLLDCLDI SSEHVALEIA NRVEAAIYVW RRRAHSRSSP NPNRSTTKSS WEIVKDFMID GDKRELLADR
401: AENILVSLKQ RFPGLSQTTL DTSKIQCNKD VGKSVLESYS RVLESMAFNI VARIDDLLYV DDLTKHSERF ALVPTTTVNM VSQQKKITRP PLSVSVSGTT
501: PHKASIGTPS FSSAAVPLIS PARGERTPFL HNINNSIKPH RRGFGVRRVL SNYLGVETKT TKICSNSTEV NCSNPSSKKT ELQQQPEQQR QKFKNRTK
101: MMKERFAKLL LGEDMSGSGK GVCTALAISN AITNLCATVF GQLWRLEPLP SEKKEMWQRE MEWLVSVSDY IVELMPSWQT YPDGSKLEVM TCRPRADIFI
201: NLPALRKLDN MLLEILDSFT ATEFWYVDQG IVAPDADGSA SFRRTIQRQE EKWWLPVPRV PPAGLSEDSR KQLNHSRECA NQILKAAMAI NSIALAEMEV
301: PESYLEVLPK NGRTCLGDFV YRYITSDQFS PECLLDCLDI SSEHVALEIA NRVEAAIYVW RRRAHSRSSP NPNRSTTKSS WEIVKDFMID GDKRELLADR
401: AENILVSLKQ RFPGLSQTTL DTSKIQCNKD VGKSVLESYS RVLESMAFNI VARIDDLLYV DDLTKHSERF ALVPTTTVNM VSQQKKITRP PLSVSVSGTT
501: PHKASIGTPS FSSAAVPLIS PARGERTPFL HNINNSIKPH RRGFGVRRVL SNYLGVETKT TKICSNSTEV NCSNPSSKKT ELQQQPEQQR QKFKNRTK
001: MENLVKSCAG IEKKRSNLTP SMEDILTESK ERSSTSGASY ESSSTTTVAS SSPPPPPSQI LGWPIRKASF RKNSKESVNF DHKKLTLHDD SGFKAKEMNS
101: ADVEMMKERF AKLLLGEDMS GSGKGVCTAL AISNAITNLC ATIFGQLWRL EPLSSEKKEM WRREMEWILS VSDHIVELTP STQTYPDGNK FEVMTCRPRF
201: DLFINLPALR KLDNMLLDIL ASFKKTEFWY VDQGIVASEN DGSASFRRKI QRQEEKWWLP VPRLAPNGLT EEARTELNHK RECATQILKA AMAINSLALT
301: EMDVPKSYLE TLPKNGRSCL GDVIYRYVTS DKFSAESLLD CLDLSSEHIA LDIANRVEAS IYVWRRRVQT KLGVNNNTSS TTPKLTWEMV KELMAAGDKR
401: GLLVERSETL LRCLKQRFPS LTQTSLDISK IQWNKDIGKS ILESYSRALE SLASNIIARI DDLLYVDDLT KQSDDNNLLS SPAVSSIIAH KKVVPLPYLI
501: SASGTPYRTS FSTTPGFSPS MISPKKGERR TPYSSKDTNK IIEKGLPSRG YGVRRVLNNY LGMESKLKIC VNPSDNADTA VINQISKDVE EEKKRNSTSV
601: HQKGPPKYTV S
101: ADVEMMKERF AKLLLGEDMS GSGKGVCTAL AISNAITNLC ATIFGQLWRL EPLSSEKKEM WRREMEWILS VSDHIVELTP STQTYPDGNK FEVMTCRPRF
201: DLFINLPALR KLDNMLLDIL ASFKKTEFWY VDQGIVASEN DGSASFRRKI QRQEEKWWLP VPRLAPNGLT EEARTELNHK RECATQILKA AMAINSLALT
301: EMDVPKSYLE TLPKNGRSCL GDVIYRYVTS DKFSAESLLD CLDLSSEHIA LDIANRVEAS IYVWRRRVQT KLGVNNNTSS TTPKLTWEMV KELMAAGDKR
401: GLLVERSETL LRCLKQRFPS LTQTSLDISK IQWNKDIGKS ILESYSRALE SLASNIIARI DDLLYVDDLT KQSDDNNLLS SPAVSSIIAH KKVVPLPYLI
501: SASGTPYRTS FSTTPGFSPS MISPKKGERR TPYSSKDTNK IIEKGLPSRG YGVRRVLNNY LGMESKLKIC VNPSDNADTA VINQISKDVE EEKKRNSTSV
601: HQKGPPKYTV S
Arabidopsis Description
ROPGEF5Rop guanine nucleotide exchange factor 5 [Source:UniProtKB/Swiss-Prot;Acc:F4K295]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.