Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 1
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15734 | Soybean | cytosol | 65.77 | 28.08 |
| KRH48179 | Soybean | nucleus | 68.47 | 20.27 |
| KRH00737 | Soybean | nucleus, plastid | 81.08 | 17.58 |
| KRH40457 | Soybean | cytosol | 78.38 | 16.99 |
| KRH65102 | Soybean | nucleus | 69.37 | 16.01 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 10.81 | 16.0 |
| PGSC0003DMT400000136 | Potato | nucleus | 57.66 | 13.42 |
| Solyc01g094610.2.1 | Tomato | nucleus | 56.76 | 13.21 |
| AT4G00460.2 | Thale cress | nucleus | 54.05 | 12.69 |
| Bra037342.1-P | Field mustard | cytosol | 54.05 | 12.58 |
| Bra000971.1-P | Field mustard | nucleus | 53.15 | 12.34 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 52.25 | 12.16 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 52.25 | 12.16 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 54.95 | 12.1 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 53.15 | 12.07 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 51.35 | 11.92 |
| TraesCS1B01G222700.1 | Wheat | plastid | 51.35 | 11.92 |
| Os10t0550300-00 | Rice | plastid | 51.35 | 11.9 |
| EER99384 | Sorghum | nucleus, plastid | 49.55 | 11.88 |
| EER91970 | Sorghum | plastid | 52.25 | 11.86 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 49.55 | 11.85 |
| AT1G01700.4 | Thale cress | nucleus | 53.15 | 11.46 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 48.65 | 11.2 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 45.95 | 11.16 |
| Os07t0481100-01 | Rice | cytosol | 45.95 | 11.09 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 45.05 | 10.94 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 45.95 | 10.92 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 45.95 | 10.83 |
| Zm00001d002696_P001 | Maize | cytosol | 44.14 | 10.61 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 44.14 | 10.54 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 44.14 | 10.47 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 44.14 | 10.43 |
| EES11256 | Sorghum | nucleus | 44.14 | 10.4 |
| KRH73109 | Soybean | nucleus | 46.85 | 9.34 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 44.14 | 9.23 |
| KRH29101 | Soybean | cytosol, plastid | 45.95 | 9.01 |
| KRH24128 | Soybean | cytosol | 45.95 | 8.98 |
| KRH75747 | Soybean | nucleus | 46.85 | 8.89 |
| KRH31060 | Soybean | nucleus | 47.75 | 8.86 |
| KRH44350 | Soybean | nucleus | 36.04 | 8.81 |
| KRH00070 | Soybean | nucleus | 48.65 | 8.81 |
| KRH65969 | Soybean | nucleus | 47.75 | 8.77 |
| KRG97804 | Soybean | nucleus | 45.95 | 8.6 |
| KRH15022 | Soybean | nucleus | 43.24 | 8.56 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 40.54 | 8.11 |
| KRH39304 | Soybean | nucleus | 37.84 | 8.08 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 39.64 | 7.91 |
| KRH09881 | Soybean | cytosol | 37.84 | 7.88 |
| KRH23439 | Soybean | nucleus | 37.84 | 7.87 |
| KRH39757 | Soybean | mitochondrion, nucleus | 38.74 | 7.64 |
| KRH49210 | Soybean | nucleus, plastid | 48.65 | 7.55 |
| KRH76428 | Soybean | mitochondrion, nucleus | 37.84 | 7.46 |
| KRH47282 | Soybean | nucleus | 36.04 | 7.43 |
| KRH48369 | Soybean | mitochondrion | 36.04 | 7.12 |
| Os04t0559100-00 | Rice | cytosol | 2.7 | 1.65 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:35.1 | EMBL:ACUP02011917 | EnsemblPlantsGene:GLYMA_19G072200 | GO:GO:0003674 | GO:GO:0005085 |
| GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 |
| UniProt:K7MX15 | EnsemblPlants:KRG94270 | ProteinID:KRG94270 | ProteinID:KRG94270.1 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF9 | InterPro:RopGEF | UniParc:UPI0002960808 | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:25481202..25481630
Molecular Weight (calculated)
12536.2 Da
IEP (calculated)
10.420
GRAVY (calculated)
-0.515
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSKPRSNIY VNLPALQKLG TMLIEILDTF QDIEFWYAEN IPGNSSRLRG ASFRKIVPRK DDKWWLPIPC ALPGGLSDKS RKHSIEKRDY ANQIVPTLTS
101: LPPPSPSSTA K
101: LPPPSPSSTA K
001: MENLSNPDEN DDHQSPRSID QNDQSAVETP VYSTMSIDSF VYPRTCSETT SGFSDQIDET NSFCSEASPC NWPVLTESKS SKCLSGLEMQ SNECLVVQEI
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKV FFFVTFIHSY LLGILKF
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKV FFFVTFIHSY LLGILKF
Arabidopsis Description
ROPGEF3Rop guanine nucleotide exchange factor 3 [Source:UniProtKB/Swiss-Prot;Acc:A4IJ27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.