CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00737	Soybean	nucleus, plastid	94.73	94.73
KRG94270	Soybean	mitochondrion	16.99	78.38
KRH65102	Soybean	nucleus	68.75	73.18
KRH15734	Soybean	cytosol	35.94	70.77
KRH48179	Soybean	nucleus	50.59	69.07
PGSC0003DMT400000136	Potato	nucleus	59.38	63.73
Solyc01g094610.2.1	Tomato	nucleus	59.18	63.52
AT4G00460.2	Thale cress	nucleus	57.62	62.37
Bra000971.1-P	Field mustard	nucleus	57.81	61.92
Bra037342.1-P	Field mustard	cytosol	57.42	61.64
VIT_15s0046g02530.t01	Wine grape	plastid	59.38	60.32
AT1G01700.4	Thale cress	nucleus	57.23	56.89
GSMUA_Achr5P20570_001	Banana	nucleus	51.95	55.19
Zm00001d002696_P001	Maize	cytosol	48.44	53.68
Os10t0550300-00	Rice	plastid	50.2	53.65
EER91970	Sorghum	plastid	50.98	53.37
EES11256	Sorghum	nucleus	49.02	53.29
Zm00001d029850_P001	Maize	nucleus, plastid	50.78	53.17
TraesCS2B01G426300.1	Wheat	cytosol	48.05	52.9
Os04t0559100-00	Rice	cytosol	18.75	52.75
TraesCS1D01G211900.1	Wheat	nucleus	49.02	52.62
TraesCS1A01G208700.1	Wheat	nucleus	48.83	52.41
TraesCS2A01G408100.1	Wheat	cytosol	47.85	52.35
TraesCS1B01G222700.1	Wheat	plastid	48.83	52.3
TraesCS2D01G405400.1	Wheat	nucleus	47.85	52.13
HORVU1Hr1G053350.4	Barley	nucleus, plastid	48.63	52.09
Os07t0481100-01	Rice	cytosol	46.29	51.52
EER99384	Sorghum	nucleus, plastid	46.29	51.19
Zm00001d021489_P001	Maize	nucleus, plastid	46.29	51.08
TraesCS6A01G405000.1	Wheat	nucleus	45.12	50.55
HORVU6Hr1G092860.2	Barley	nucleus	44.92	50.33
TraesCS6D01G388300.1	Wheat	nucleus	45.51	49.89
TraesCS6B01G449200.1	Wheat	nucleus	45.31	49.26
HORVU2Hr1G096430.13	Barley	mitochondrion	47.85	46.14
KRH73109	Soybean	nucleus	44.73	41.11
KRH44350	Soybean	nucleus	35.35	39.87
KRH31060	Soybean	nucleus	46.48	39.8
KRG97804	Soybean	nucleus	45.51	39.29
KRH29101	Soybean	cytosol, plastid	42.97	38.87
KRH15022	Soybean	nucleus	42.38	38.68
KRH75747	Soybean	nucleus	43.95	38.46
KRH24128	Soybean	cytosol	42.58	38.38
KRH65969	Soybean	nucleus	44.92	38.08
KRH00070	Soybean	nucleus	45.12	37.68
KRH39304	Soybean	nucleus	36.91	36.35
KRH47282	Soybean	nucleus	37.3	35.5
KRH09881	Soybean	cytosol	36.72	35.27
KRH23439	Soybean	nucleus	36.72	35.21
KRH48369	Soybean	mitochondrion	36.72	33.45
KRH07240	Soybean	cytosol, nucleus, plastid	34.96	32.19
KRH49210	Soybean	nucleus, plastid	44.92	32.17
KRH07751	Soybean	cytosol, nucleus, plastid	34.57	31.89
KRH76428	Soybean	mitochondrion, nucleus	34.96	31.79
KRH39757	Soybean	mitochondrion, nucleus	34.57	31.44

Protein Annotations

Gene3D:1.20.58.1310	Gene3D:1.20.58.2010	EntrezGene:100811579	MapMan:27.4.3.1	EMBL:ACUP02006038	EnsemblPlantsGene:GLYMA_09G259500
GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0065009	InterPro:IPR005512	UniProt:K7LG49	EnsemblPlants:KRH40457	ProteinID:KRH40457	ProteinID:KRH40457.1
PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF9	InterPro:RopGEF
UniParc:UPI0001BA5717	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:47817099..47821004

Molecular Weight (calculated)

58268.3 Da

IEP (calculated)

5.143

GRAVY (calculated)

-0.452

Length

512 amino acids

Sequence
(BLAST)

001: MDKSSKFDEN SDVGYHPSSP SNTPDFSPMS GDSFTYCQTW TSPESETVDE SSYASEPSPS RWRAKQDVLS KLGMKLREHS MDDKLDACVD SAELELMKER
101: FAKLLLGEDM SGSGKGVCTA VTISNAITNL YATVFGQSLK LEPLKPEKSA MWKREMKVLL SVCDYIQEFA PTAQYLEDGT IVEMMKSRPR LDIYVNLPAL
201: QKLDTMLIEI LDTFQDTEFW YAENIPGNSS RLRGASFRTK FPRKDGKWWL PVPCVLPGGL SDKSRKHLIE KRDCANQIHK AAMAINSSVL AEIDIPEKYI
301: DNLPELRFYC QVTEDSIKCD PIKQMSWNFS SNFISLLWKP IIAAESCRKR DDIVSIKSGR SSVGDSIYLY MQTADKFSPE QLLDCLKISS EHEALELADR
401: VESSMYTWRR KACLTHSKSS WSKVKDLIED TDSKDKNYTL AERAESLLLC LKQRYPELSQ TSLDTCKIQY NRDVGNAILE SYSRVLEGLA FNIVAWIEDV
501: LYVDKSMRNR DV

Best Arabidopsis Sequence Match ( AT1G01700.1 )
(BLAST)

001: MENLPNHEEN DDVGYHQSPG PIDPNDHSAS ETPVYSTMST DSFAYHRTCS ETSGGGFSDQ IDETSSFCTE ASPSDWPVLT ESNNSASSNF PTVFDLKHNQ
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK EEKWWLPIPL VPLQGLSEKA RKQLKSKRES
301: TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ LADRVEASMY TWRRKACLNN SKSSWNMVKD
401: LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MRGEE

Arabidopsis Description

ATROPGEF2RHO guanyl-nucleotide exchange factor 2 [Source:TAIR;Acc:AT1G01700]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.