Factsheet for HORVU2Hr1G096430.13

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G076210.5
HORVU7Hr1G038980.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45890.1	HORVU6Hr1G076210.5	AT5G62880.1	22500990
AT2G45890.1	HORVU7Hr1G038980.5	AT5G62880.1	22500990

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G426300.1	Wheat	cytosol	83.8	95.7
TraesCS2D01G405400.1	Wheat	nucleus	84.18	95.11
TraesCS2A01G408100.1	Wheat	cytosol	83.8	95.09
Zm00001d002696_P001	Maize	cytosol	70.06	80.52
EES11256	Sorghum	nucleus	70.81	79.83
Os04t0559100-00	Rice	cytosol	24.86	72.53
HORVU1Hr1G053350.4	Barley	nucleus, plastid	51.04	56.69
GSMUA_Achr5P20570_001	Banana	nucleus	50.28	55.39
HORVU6Hr1G092860.2	Barley	nucleus	46.33	53.83
KRH15734	Soybean	cytosol	25.99	53.08
PGSC0003DMT400000136	Potato	nucleus	47.08	52.41
Solyc01g094610.2.1	Tomato	nucleus	47.08	52.41
CDY57376	Canola	cytosol, extracellular, nucleus	7.34	52.0
CDY70620	Canola	nucleus	44.82	50.75
CDY07216	Canola	cytosol	45.2	50.53
KRH65102	Soybean	nucleus	45.76	50.52
CDY51157	Canola	nucleus	43.13	50.33
AT4G00460.2	Thale cress	nucleus	44.82	50.32
Bra000971.1-P	Field mustard	nucleus	45.01	50.0
Bra037342.1-P	Field mustard	cytosol	44.63	49.69
VIT_15s0046g02530.t01	Wine grape	plastid	46.89	49.4
KRH48179	Soybean	nucleus	34.84	49.33
KRH00737	Soybean	nucleus, plastid	46.7	48.44
CDX74772	Canola	nucleus, plastid	40.68	48.0
KRH40457	Soybean	cytosol	46.14	47.85
CDY18892	Canola	nucleus	40.68	47.79
AT1G01700.4	Thale cress	nucleus	45.95	47.38
Bra004945.1-P	Field mustard	nucleus, plastid	40.87	47.17
AT2G45890.1	Thale cress	nucleus, plastid	40.68	46.65
KRG94270	Soybean	mitochondrion	9.23	44.14
HORVU1Hr1G072910.3	Barley	cytosol	41.05	38.65
HORVU5Hr1G085510.1	Barley	nucleus, plastid	40.49	37.99
CDX91908	Canola	cytosol	46.7	37.86
HORVU3Hr1G073200.1	Barley	nucleus	32.2	35.92
HORVU3Hr1G085680.2	Barley	plastid	42.0	34.15
HORVU6Hr1G050860.4	Barley	mitochondrion	32.02	33.8
HORVU3Hr1G062030.1	Barley	nucleus, plastid	35.97	30.76
HORVU1Hr1G086590.2	Barley	plastid	34.46	27.15
HORVU6Hr1G068660.4	Barley	nucleus	27.5	24.13
HORVU6Hr1G041610.18	Barley	plastid	28.63	20.27

Protein Annotations

EnsemblPlants:HORVU2Hr1G096430.13	EnsemblPlantsGene:HORVU2Hr1G096430	Gene3D:1.20.58.2010	GO:GO:0003674	GO:GO:0005085	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	InterPro:IPR005512	InterPro:PRONE_dom	InterPro:RopGEF
PANTHER:PTHR33101	PANTHER:PTHR33101:SF7	PFAM:PF03759	PFscan:PS51334	SEG:seg	UniParc:UPI000B467570
UniProt:A0A287J1S3	MapMan:27.4.3.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:674388684..674391178

Molecular Weight (calculated)

59156.7 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.436

Length

531 amino acids

Sequence
(BLAST)

001: PRMFLLLRHP LCPPLRHHHR YPIPIPIPSC PGSIARRAPS RRTPHAPPRA LRACTERPVV LVDGACAGIG MDTPTSSTWE EGSQSDYADL DDDDMPMERQ
101: RGGVLRALNL RRDDEDDDVS SECSGELGSP YGSPYPRWPV CKLAARLPPP APLLQRLGAE PRDRKAGCTE LQLMKERFSK LLLGEDMSGG GKGVSTAAAI
201: SNAITNLYAT VFGSCHRLEP LPVEKKSMWR REMDCLLSVC DYIVEFFPSK DILPDGTTRE VMATRPRSDI YVNLPALEKL DDMLLEILDG FQKTEFWYLN
301: DKAHKDSCDD SAPCRPASHR GEERWWLPVP CVTKSGLTES ARRDLQQKHD CASQIHKAAM AINNGILAEI KIPESYTQTL PKCGRASVGD ALYRGMSFPG
401: KFSPEYLLDC LEISSEHEAL EAADRVEAAM HVWRRKADHG HARSPWGAVK DLMESDKNVM LASRAEDTLL CLKHRFPGLS QTTLDASKIQ HNKDVGQAVL
501: ESYSRVLESL AYTIVTCIDD VLFADESARK I

Best Arabidopsis Sequence Match ( AT1G01700.1 )
(BLAST)

001: MENLPNHEEN DDVGYHQSPG PIDPNDHSAS ETPVYSTMST DSFAYHRTCS ETSGGGFSDQ IDETSSFCTE ASPSDWPVLT ESNNSASSNF PTVFDLKHNQ
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK EEKWWLPIPL VPLQGLSEKA RKQLKSKRES
301: TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ LADRVEASMY TWRRKACLNN SKSSWNMVKD
401: LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MRGEE

Arabidopsis Description

ATROPGEF2RHO guanyl-nucleotide exchange factor 2 [Source:TAIR;Acc:AT1G01700]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.