Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94270 | Soybean | mitochondrion | 28.08 | 65.77 |
| KRH48179 | Soybean | nucleus | 91.54 | 63.47 |
| KRH65102 | Soybean | nucleus | 87.69 | 47.4 |
| KRH00737 | Soybean | nucleus, plastid | 71.92 | 36.52 |
| KRH40457 | Soybean | cytosol | 70.77 | 35.94 |
| PGSC0003DMT400000136 | Potato | nucleus | 65.77 | 35.85 |
| Solyc01g094610.2.1 | Tomato | nucleus | 65.38 | 35.64 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 66.15 | 34.13 |
| AT4G00460.2 | Thale cress | nucleus | 60.77 | 33.4 |
| Bra037342.1-P | Field mustard | cytosol | 60.77 | 33.12 |
| Bra000971.1-P | Field mustard | nucleus | 60.77 | 33.05 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 58.85 | 32.08 |
| TraesCS1B01G222700.1 | Wheat | plastid | 58.85 | 32.01 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 58.46 | 31.87 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 58.08 | 31.33 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 57.31 | 31.17 |
| Os10t0550300-00 | Rice | plastid | 57.31 | 31.11 |
| EER91970 | Sorghum | plastid | 58.46 | 31.08 |
| AT1G01700.4 | Thale cress | nucleus | 61.54 | 31.07 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 57.69 | 30.67 |
| Zm00001d002696_P001 | Maize | cytosol | 53.46 | 30.09 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 53.46 | 29.89 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 53.46 | 29.7 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 53.46 | 29.57 |
| EES11256 | Sorghum | nucleus | 53.46 | 29.51 |
| Os07t0481100-01 | Rice | cytosol | 50.77 | 28.7 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 50.77 | 28.45 |
| EER99384 | Sorghum | nucleus, plastid | 50.38 | 28.29 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 49.62 | 28.23 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 49.62 | 27.62 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 48.46 | 27.57 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 49.23 | 27.18 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 53.08 | 25.99 |
| KRH31060 | Soybean | nucleus | 56.15 | 24.41 |
| KRG97804 | Soybean | nucleus | 54.62 | 23.95 |
| KRH44350 | Soybean | nucleus | 40.77 | 23.35 |
| KRH73109 | Soybean | nucleus | 50.0 | 23.34 |
| KRH75747 | Soybean | nucleus | 52.31 | 23.25 |
| KRH65969 | Soybean | nucleus | 53.08 | 22.85 |
| KRH29101 | Soybean | cytosol, plastid | 49.23 | 22.61 |
| KRH00070 | Soybean | nucleus | 53.08 | 22.51 |
| KRH24128 | Soybean | cytosol | 48.85 | 22.36 |
| KRH39304 | Soybean | nucleus | 42.31 | 21.15 |
| KRH23439 | Soybean | nucleus | 42.31 | 20.6 |
| KRH15022 | Soybean | nucleus | 44.23 | 20.5 |
| KRH09881 | Soybean | cytosol | 41.92 | 20.45 |
| KRH47282 | Soybean | nucleus | 41.15 | 19.89 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 41.54 | 19.42 |
| KRH48369 | Soybean | mitochondrion | 41.92 | 19.39 |
| KRH49210 | Soybean | nucleus, plastid | 53.08 | 19.3 |
| KRH39757 | Soybean | mitochondrion, nucleus | 41.15 | 19.01 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 40.38 | 18.92 |
| KRH76428 | Soybean | mitochondrion, nucleus | 40.77 | 18.83 |
| Os04t0559100-00 | Rice | cytosol | 0.77 | 1.1 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | EMBL:ACUP02008637 | ncoils:Coil | EnsemblPlantsGene:GLYMA_14G107900 | GO:GO:0003674 |
| GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 |
| InterPro:IPR005512 | UniProt:K7M645 | EnsemblPlants:KRH15734 | ProteinID:KRH15734 | ProteinID:KRH15734.1 | PFAM:PF03759 |
| InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF9 | InterPro:RopGEF | UniParc:UPI00029487F3 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:11631502..11632737
Molecular Weight (calculated)
29616.8 Da
IEP (calculated)
7.100
GRAVY (calculated)
-0.410
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHGASQAVI SMLGVKQHRH SVDEKSDDLD LLETELDMMR ERFSKLLLGE DMSGVGKGVC TAVTISNSIT NLYDNFFNTT AFGQNLKLEP LKPEKKAMWR
101: REMNCLLSVC DYILEFSPTA QYLEDGTIVE MMTSKPRSDI YINLPALQKL DTMLIEILDS FQDTKFWYAE QGTISRNSTR SRGGSFRRIV QRKDEKWWLP
201: VPCVHLGGLI DKSRKHLNEK RDCANQIHKA AMAINSSALA EMDIPETYMS NLPKDSTKLL
101: REMNCLLSVC DYILEFSPTA QYLEDGTIVE MMTSKPRSDI YINLPALQKL DTMLIEILDS FQDTKFWYAE QGTISRNSTR SRGGSFRRIV QRKDEKWWLP
201: VPCVHLGGLI DKSRKHLNEK RDCANQIHKA AMAINSSALA EMDIPETYMS NLPKDSTKLL
001: MENLPNHEEN DDVGYHQSPG PIDPNDHSAS ETPVYSTMST DSFAYHRTCS ETSGGGFSDQ IDETSSFCTE ASPSDWPVLT ESNNSASSNF PTVFDLKHNQ
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK EEKWWLPIPL VPLQGLSEKA RKQLKSKRES
301: TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ LADRVEASMY TWRRKACLNN SKSSWNMVKD
401: LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MRGEE
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK EEKWWLPIPL VPLQGLSEKA RKQLKSKRES
301: TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ LADRVEASMY TWRRKACLNN SKSSWNMVKD
401: LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MRGEE
Arabidopsis Description
ATROPGEF2RHO guanyl-nucleotide exchange factor 2 [Source:TAIR;Acc:AT1G01700]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.