CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15734	Soybean	cytosol	63.47	91.54
KRH65102	Soybean	nucleus	94.4	73.6
KRG94270	Soybean	mitochondrion	20.27	68.47
PGSC0003DMT400000136	Potato	nucleus	68.27	53.67
Solyc01g094610.2.1	Tomato	nucleus	67.73	53.25
KRH00737	Soybean	nucleus, plastid	70.13	51.37
KRH40457	Soybean	cytosol	69.07	50.59
AT4G00460.2	Thale cress	nucleus	61.07	48.41
Bra000971.1-P	Field mustard	nucleus	61.07	47.91
VIT_15s0046g02530.t01	Wine grape	plastid	63.73	47.42
Bra037342.1-P	Field mustard	cytosol	59.47	46.75
AT1G01700.4	Thale cress	nucleus	61.6	44.85
GSMUA_Achr5P20570_001	Banana	nucleus	54.93	42.74
TraesCS1D01G211900.1	Wheat	nucleus	53.6	42.14
TraesCS1B01G222700.1	Wheat	plastid	53.6	42.05
TraesCS1A01G208700.1	Wheat	nucleus	53.07	41.72
Os10t0550300-00	Rice	plastid	52.8	41.34
HORVU1Hr1G053350.4	Barley	nucleus, plastid	52.53	41.21
Zm00001d002696_P001	Maize	cytosol	49.87	40.48
TraesCS2B01G426300.1	Wheat	cytosol	50.13	40.43
EER91970	Sorghum	plastid	52.53	40.29
TraesCS2A01G408100.1	Wheat	cytosol	49.87	39.96
EES11256	Sorghum	nucleus	50.13	39.92
TraesCS2D01G405400.1	Wheat	nucleus	49.87	39.79
Zm00001d029850_P001	Maize	nucleus, plastid	51.47	39.47
Zm00001d021489_P001	Maize	nucleus, plastid	48.0	38.79
EER99384	Sorghum	nucleus, plastid	47.73	38.66
TraesCS6A01G405000.1	Wheat	nucleus	46.93	38.51
HORVU6Hr1G092860.2	Barley	nucleus	46.67	38.29
TraesCS6D01G388300.1	Wheat	nucleus	47.47	38.12
Os07t0481100-01	Rice	cytosol	46.4	37.83
TraesCS6B01G449200.1	Wheat	nucleus	46.93	37.37
HORVU2Hr1G096430.13	Barley	mitochondrion	49.33	34.84
KRH31060	Soybean	nucleus	50.13	31.44
KRG97804	Soybean	nucleus	49.07	31.03
KRH73109	Soybean	nucleus	45.07	30.34
KRH29101	Soybean	cytosol, plastid	45.07	29.86
KRH75747	Soybean	nucleus	45.87	29.4
KRH65969	Soybean	nucleus	46.93	29.14
KRH44350	Soybean	nucleus	35.2	29.07
KRH24128	Soybean	cytosol	44.0	29.05
KRH00070	Soybean	nucleus	46.13	28.22
KRH15022	Soybean	nucleus	40.53	27.09
KRH23439	Soybean	nucleus	37.07	26.03
KRH09881	Soybean	cytosol	36.8	25.89
KRH47282	Soybean	nucleus	37.07	25.84
KRH39304	Soybean	nucleus	35.2	25.38
KRH07240	Soybean	cytosol, nucleus, plastid	36.27	24.46
KRH49210	Soybean	nucleus, plastid	46.13	24.2
KRH07751	Soybean	cytosol, nucleus, plastid	35.47	23.96
KRH76428	Soybean	mitochondrion, nucleus	35.73	23.8
KRH39757	Soybean	mitochondrion, nucleus	35.2	23.45
KRH48369	Soybean	mitochondrion	34.93	23.31
Os04t0559100-00	Rice	cytosol	8.0	16.48

Protein Annotations

Gene3D:1.20.58.2010	MapMan:27.4.3.1	EMBL:ACUP02004210	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G073200	GO:GO:0003674
GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0065009
UniProt:I1KID8	InterPro:IPR005512	ProteinID:KRH48178.1	EnsemblPlants:KRH48179	ProteinID:KRH48179	ProteinID:KRH48179.1
ProteinID:KRH48180.1	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF9
InterPro:RopGEF	UniParc:UPI00023C6D83	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:6667632..6671054

Molecular Weight (calculated)

41950.1 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.531

Length

375 amino acids

Sequence
(BLAST)

001: MDNSSNFDDN SDVGYQPSPS SVDQNDHSIT ENVGYSPLFS GESFAYCRSN SEVSNFSEPI DDNSFASEPS PSLWTPMKHG ASQAALSRLG VKQHRHSVDE
101: KSDDLDLLET ELDMMRERFS KLLLGEDMSG GGKGVCTAVT ISNSITNLYA TAFGQNLKLE PLKPEKKAMW RREMNCLLSV CDYIVEFSPT AQYLEDGTIV
201: EMMTSKPRSD IYINLPALQK LDTMLIEILD SFQDTEFWYA EQGSISGNST RSRGGSFRRI VQRKDEKWWL PVPCVHTGGL SDKSRKHLNE KRDCANQIHK
301: AAMAINSSAL AEMDIPETYM SNLPKSGRTS LGDTIYRCMY SADKFSPDHL LDCLKISSEH EALELADKVE SSMFT

Best Arabidopsis Sequence Match ( AT1G01700.1 )
(BLAST)

001: MENLPNHEEN DDVGYHQSPG PIDPNDHSAS ETPVYSTMST DSFAYHRTCS ETSGGGFSDQ IDETSSFCTE ASPSDWPVLT ESNNSASSNF PTVFDLKHNQ
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK EEKWWLPIPL VPLQGLSEKA RKQLKSKRES
301: TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ LADRVEASMY TWRRKACLNN SKSSWNMVKD
401: LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW IDDVLYVDKT MRGEE

Arabidopsis Description

ATROPGEF2RHO guanyl-nucleotide exchange factor 2 [Source:TAIR;Acc:AT1G01700]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.