Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G00460.2 | Thale cress | nucleus | 77.48 | 84.36 |
| Solyc01g094610.2.1 | Tomato | nucleus | 60.0 | 64.78 |
| KRH65102 | Soybean | nucleus | 60.39 | 64.66 |
| PGSC0003DMT400000136 | Potato | nucleus | 59.61 | 64.36 |
| KRH48179 | Soybean | nucleus | 44.85 | 61.6 |
| KRH15734 | Soybean | cytosol | 31.07 | 61.54 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 59.22 | 60.52 |
| AT2G45890.1 | Thale cress | nucleus, plastid | 53.4 | 59.4 |
| KRH00737 | Soybean | nucleus, plastid | 58.06 | 58.4 |
| KRH40457 | Soybean | cytosol | 56.89 | 57.23 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 51.65 | 55.19 |
| Os10t0550300-00 | Rice | plastid | 49.9 | 53.65 |
| Zm00001d002696_P001 | Maize | cytosol | 47.96 | 53.46 |
| EES11256 | Sorghum | nucleus | 48.74 | 53.29 |
| KRG94270 | Soybean | mitochondrion | 11.46 | 53.15 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 47.77 | 52.9 |
| TraesCS1B01G222700.1 | Wheat | plastid | 48.74 | 52.51 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 47.57 | 52.35 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 48.35 | 52.2 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 48.35 | 52.2 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 47.57 | 52.13 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 48.35 | 52.09 |
| Os04t0559100-00 | Rice | cytosol | 18.25 | 51.65 |
| EER91970 | Sorghum | plastid | 47.96 | 50.51 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 47.77 | 50.31 |
| Os07t0481100-01 | Rice | cytosol | 44.85 | 50.22 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 44.66 | 49.57 |
| EER99384 | Sorghum | nucleus, plastid | 44.27 | 49.24 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 43.69 | 49.23 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 43.69 | 49.23 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 44.08 | 48.61 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 43.88 | 47.98 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 47.38 | 45.95 |
| AT5G02010.1 | Thale cress | nucleus | 43.69 | 41.21 |
| AT4G38430.1 | Thale cress | nucleus | 41.55 | 39.05 |
| AT5G05940.1 | Thale cress | cytosol | 44.08 | 37.15 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 40.97 | 36.44 |
| AT1G79860.1 | Thale cress | nucleus | 35.15 | 35.15 |
| AT4G13240.1 | Thale cress | nucleus | 34.76 | 34.62 |
| AT3G24620.1 | Thale cress | nucleus | 34.76 | 34.23 |
| AT1G52240.1 | Thale cress | nucleus | 35.53 | 33.7 |
| AT3G16130.1 | Thale cress | nucleus | 33.2 | 31.78 |
| AT5G19560.4 | Thale cress | mitochondrion | 31.46 | 31.64 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 32.43 | 28.99 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | EntrezGene:839250 | UniProt:A0A1P8ASA3 | ProteinID:ANM59534.1 |
| ArrayExpress:AT1G01700 | EnsemblPlantsGene:AT1G01700 | RefSeq:AT1G01700 | TAIR:AT1G01700 | RefSeq:AT1G01700-TAIR-G | EnsemblPlants:AT1G01700.4 |
| Symbol:ATROPGEF2 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 | RefSeq:NP_001321884.1 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF9 | InterPro:RopGEF | UniParc:UPI00084959CA | : |
Description
ATROPGEF2RHO guanyl-nucleotide exchange factor 2 [Source:TAIR;Acc:AT1G01700]
Coordinates
chr1:-:259495..261615
Molecular Weight (calculated)
58045.6 Da
IEP (calculated)
5.058
GRAVY (calculated)
-0.463
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLPNHEEN DDVGYHQSPG PIDPNDHSAS ETPVYSTMST DSFAYHRTCS ETSGGGFSDQ IDETSSFCTE ASPSDWPVLT ESNNSASSNF PTVFDLKHNQ
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MVVTTPEQEA IINKIDSVNI PHKSHSLCFL QEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK
301: EEKWWLPIPL VPLQGLSEKA RKQLKSKRES TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ
401: LADRVEASMY TWRRKACLNN SKSSWNMVKD LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW
501: IDDVLYVDKT MRGEE
101: IETDEHLAVQ EISEPELETM KERFSKLLLG EDMSGSGKGV CTAVTISNAI TNLYATVFGQ NLRLEPLEIE QKTTWKREMN CLLSVCDYIF EFIPKSQNLS
201: NGATVEVMES RPRADIYINL PALRKLDSML MVVTTPEQEA IINKIDSVNI PHKSHSLCFL QEALDSFQKT EFWYAEEGSL SMKSTRSATG SFRKVIVQRK
301: EEKWWLPIPL VPLQGLSEKA RKQLKSKRES TNQIHKAAMA INSSILGEMD IPDSYMATLP KSGKASTGDA IYRHMTSSGR FSPEKLLDRL KIVSEHEALQ
401: LADRVEASMY TWRRKACLNN SKSSWNMVKD LMSITERSDK NYVLAERAES LLFCLKQRYP ELSQTSLDIC KIHCNKDVGK AVLESYSRVL EGLAFNIVAW
501: IDDVLYVDKT MRGEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.