Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G289900.1 | Wheat | cytosol | 95.04 | 94.7 |
| TraesCS1D01G280000.1 | Wheat | cytosol | 92.91 | 93.74 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 90.96 | 87.1 |
| EES18335 | Sorghum | cytosol | 78.19 | 75.26 |
| Os05t0454200-01 | Rice | nucleus | 75.71 | 75.18 |
| Zm00001d010062_P001 | Maize | peroxisome | 73.94 | 72.27 |
| GSMUA_Achr9P03750_001 | Banana | cytosol | 53.01 | 64.16 |
| PGSC0003DMT400067654 | Potato | nucleus | 53.55 | 56.77 |
| HORVU3Hr1G085680.2 | Barley | plastid | 65.43 | 56.51 |
| Solyc08g006550.2.1 | Tomato | nucleus | 53.01 | 56.42 |
| AT5G02010.1 | Thale cress | nucleus | 53.9 | 55.68 |
| Bra009621.1-P | Field mustard | nucleus | 54.08 | 54.46 |
| CDY10476 | Canola | nucleus | 54.08 | 54.46 |
| VIT_13s0019g02710.t01 | Wine grape | nucleus | 57.45 | 54.36 |
| CDY40325 | Canola | nucleus | 53.9 | 54.29 |
| VIT_08s0007g01380.t01 | Wine grape | nucleus | 56.91 | 52.71 |
| KRH73109 | Soybean | nucleus | 51.95 | 52.6 |
| Solyc09g011480.2.1 | Tomato | nucleus | 54.26 | 52.04 |
| KRG97804 | Soybean | nucleus | 53.72 | 51.1 |
| KRH31060 | Soybean | nucleus | 53.9 | 50.84 |
| KRH15022 | Soybean | nucleus | 49.82 | 50.09 |
| KRH00070 | Soybean | nucleus | 54.43 | 50.08 |
| Bra009152.1-P | Field mustard | cytosol, plastid | 52.66 | 49.92 |
| KRH75747 | Soybean | nucleus | 50.35 | 48.55 |
| KRH65969 | Soybean | nucleus | 51.95 | 48.51 |
| AT5G05940.1 | Thale cress | cytosol | 52.48 | 48.45 |
| Solyc10g086660.1.1 | Tomato | nucleus | 57.27 | 47.57 |
| CDX70109 | Canola | cytosol | 52.66 | 46.92 |
| PGSC0003DMT400049230 | Potato | nucleus | 57.45 | 46.82 |
| HORVU5Hr1G085510.1 | Barley | nucleus, plastid | 46.99 | 46.82 |
| PGSC0003DMT400005554 | Potato | cytosol, plastid | 54.43 | 46.59 |
| CDX98888 | Canola | cytosol | 52.66 | 46.55 |
| CDY40246 | Canola | cytosol, plastid | 45.92 | 46.5 |
| CDY41197 | Canola | cytosol, plastid | 45.57 | 46.39 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 37.41 | 46.17 |
| Bra007183.1-P | Field mustard | cytosol, plastid | 45.92 | 45.36 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 38.12 | 44.98 |
| AT3G55660.1 | Thale cress | cytosol, plastid | 46.1 | 44.91 |
| KRH49210 | Soybean | nucleus, plastid | 54.61 | 43.08 |
| VIT_08s0007g01390.t01 | Wine grape | nucleus | 45.39 | 43.03 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 38.65 | 41.05 |
| HORVU3Hr1G073200.1 | Barley | nucleus | 32.62 | 38.66 |
| HORVU6Hr1G050860.4 | Barley | mitochondrion | 32.8 | 36.78 |
| HORVU3Hr1G062030.1 | Barley | nucleus, plastid | 34.93 | 31.72 |
| HORVU1Hr1G086590.2 | Barley | plastid | 35.64 | 29.82 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 29.96 | 27.93 |
| HORVU6Hr1G041610.18 | Barley | plastid | 29.96 | 22.53 |
| GSMUA_Achr6P14950_001 | Banana | mitochondrion | 52.84 | 22.44 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G072910.3 | EnsemblPlantsGene:HORVU1Hr1G072910 | Gene3D:1.20.58.2010 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 | InterPro:PRONE_dom |
| InterPro:RopGEF | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF27 | PFAM:PF03759 | PFscan:PS51334 | SEG:seg |
| UniParc:UPI000B46826B | UniProt:A0A287G793 | MapMan:27.4.3.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:499643443..499646887
Molecular Weight (calculated)
61932.6 Da
IEP (calculated)
5.354
GRAVY (calculated)
-0.403
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGGGAAAE EEEEEEEEMA VSETLTAESE ECRRGSSSSA SSVAASSESY CPPDEWQQVA IKTCVTDDAA AKPPAPAPAP GKENPPGAER HRAPEVELMK
101: ERFSKLLLGE DMSGSGKGVC TALAISNAIT NLCATIFGQL WRLEPLLPEK KAMWRREMDW LLCVSDHIVE LVPTWQTFPD GTRLEIMTSR PRSDLYINLP
201: ALRKLDHMLL ETLESFRDTE FWYVDQGICA PDCDGSASFR RPAHRRDEKW WLPVPRLPPG GLRDATRRQL EHKRDAANQI LKAAMAINSN ALAEMDVPDS
301: YHDSLPKNGR ATLGDIIYRY ITSEQFSPDC LLDCLDLSSE YQAVEIANRV EAAIYVWRRR GAAAKSVGTK SSWGMVKDMI MDTEKRGDLL ADRAEGLLIS
401: LKQRFPGLTQ TSLDMSKIQY NKDVGKSILE GYSRVLESLA SNIIARIDDL LYVDELSKRT DQKLPAGVAD DGKIACNKNK KAAAMAPSPA YPVPVSGTPY
501: VTPSFSPAQL SSPSKIGRAL LVDRRAHHGR ASKRSALADH AGGPEVKGML VSSAVFDAPL DTEL
101: ERFSKLLLGE DMSGSGKGVC TALAISNAIT NLCATIFGQL WRLEPLLPEK KAMWRREMDW LLCVSDHIVE LVPTWQTFPD GTRLEIMTSR PRSDLYINLP
201: ALRKLDHMLL ETLESFRDTE FWYVDQGICA PDCDGSASFR RPAHRRDEKW WLPVPRLPPG GLRDATRRQL EHKRDAANQI LKAAMAINSN ALAEMDVPDS
301: YHDSLPKNGR ATLGDIIYRY ITSEQFSPDC LLDCLDLSSE YQAVEIANRV EAAIYVWRRR GAAAKSVGTK SSWGMVKDMI MDTEKRGDLL ADRAEGLLIS
401: LKQRFPGLTQ TSLDMSKIQY NKDVGKSILE GYSRVLESLA SNIIARIDDL LYVDELSKRT DQKLPAGVAD DGKIACNKNK KAAAMAPSPA YPVPVSGTPY
501: VTPSFSPAQL SSPSKIGRAL LVDRRAHHGR ASKRSALADH AGGPEVKGML VSSAVFDAPL DTEL
001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
Arabidopsis Description
ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.