Factsheet for Os05t0454200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G280000.1	Wheat	cytosol	74.65	75.85
HORVU1Hr1G072910.3	Barley	cytosol	75.18	75.71
TraesCS1B01G289900.1	Wheat	cytosol	75.35	75.62
EES18335	Sorghum	cytosol	76.76	74.4
Zm00001d010062_P001	Maize	peroxisome	72.18	71.06
TraesCS1A01G280900.2	Wheat	cytosol	72.71	70.12
Os01t0849100-01	Rice	cytosol	65.85	68.5
GSMUA_Achr9P03750_001	Banana	cytosol	54.75	66.74
Solyc08g006550.2.1	Tomato	nucleus	53.7	57.55
PGSC0003DMT400067654	Potato	nucleus	53.87	57.52
VIT_13s0019g02710.t01	Wine grape	nucleus	57.22	54.53
AT5G02010.1	Thale cress	nucleus	52.29	54.4
KRH73109	Soybean	nucleus	52.99	54.04
Bra009621.1-P	Field mustard	nucleus	52.99	53.75
CDY40325	Canola	nucleus	52.99	53.75
CDY10476	Canola	nucleus	52.82	53.57
VIT_08s0007g01380.t01	Wine grape	nucleus	56.87	53.04
KRH31060	Soybean	nucleus	54.93	52.17
KRG97804	Soybean	nucleus	54.4	52.11
Solyc09g011480.2.1	Tomato	nucleus	52.82	51.02
KRH15022	Soybean	nucleus	50.0	50.62
KRH00070	Soybean	nucleus	53.7	49.76
Bra009152.1-P	Field mustard	cytosol, plastid	51.76	49.41
KRH75747	Soybean	nucleus	50.35	48.89
KRH65969	Soybean	nucleus	51.94	48.84
AT5G05940.1	Thale cress	cytosol	52.11	48.45
Os10t0550300-00	Rice	plastid	40.49	48.02
Solyc10g086660.1.1	Tomato	nucleus	56.69	47.42
Os07t0481100-01	Rice	cytosol	38.38	47.39
CDY40246	Canola	cytosol, plastid	46.3	47.22
CDY41197	Canola	cytosol, plastid	45.95	47.11
PGSC0003DMT400049230	Potato	nucleus	57.04	46.82
CDX70109	Canola	cytosol	51.76	46.45
Os04t0559100-00	Rice	cytosol	14.79	46.15
CDX98888	Canola	cytosol	51.76	46.08
Bra007183.1-P	Field mustard	cytosol, plastid	46.3	46.06
PGSC0003DMT400005554	Potato	cytosol, plastid	53.17	45.83
AT3G55660.1	Thale cress	cytosol, plastid	46.3	45.42
Os09t0544800-01	Rice	nucleus	44.72	45.28
VIT_08s0007g01390.t01	Wine grape	nucleus	45.77	43.7
KRH49210	Soybean	nucleus, plastid	53.7	42.66
Os01t0760300-01	Rice	plasma membrane	34.68	37.81
Os02t0272300-01	Rice	plasma membrane	33.45	37.04
Os05t0560100-01	Rice	mitochondrion	36.27	36.2
Os01t0675000-01	Rice	mitochondrion	33.45	34.3
Os02t0702600-02	Rice	cytosol	32.57	34.07
GSMUA_Achr6P14950_001	Banana	mitochondrion	53.35	22.82

Protein Annotations

Gene3D:1.20.58.2010	MapMan:27.4.3.1	EntrezGene:4338974	ProteinID:AAT47041.1	ProteinID:BAF17632.1	ProteinID:BAS94346.1
ProteinID:EEE63942.1	GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	InterPro:IPR005512	EnsemblPlantsGene:Os05g0454200	EnsemblPlants:Os05t0454200-01	PFAM:PF03759	InterPro:PRONE_dom
PFscan:PS51334	PANTHER:PTHR33101	PANTHER:PTHR33101:SF27	UniProt:Q6I638	InterPro:RopGEF	UniParc:UPI00003B0D34
RefSeq:XP_015638420.1	SEG:seg	:	:	:	:

Description

BRIGHT GREEN LEAFGuanine nucleotide exchange factors for Rop, Activation of small cuticular papillae development on leaf epidermis (Os05t0454200-01)

Coordinates

chr5:+:22293498..22297207

Molecular Weight (calculated)

62306.9 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.357

Length

568 amino acids

Sequence
(BLAST)

001: MARGGGGGEE AAEEEREVSE ALTADSSADE ECRRGSSSSS ASSGDASSES YCPPDEWQKV AIKTCVSSDL VVVSAEPAKE KKPPPPPSSP RVDAAPADKH
101: HRPSEMEMMK ERFAKLLLGE DMSGGGKGVC TALAISNAIT NLCATIFGQL WRLEPLLPEK KTMWRREMDW LLCVSDHIVE LVPTWQTFPD GSKLEIMTSR
201: PRSDLYINLP ALRKLDHMLL EILESFRDPE FWYVDQGICP PDRDGSAPFM LTFHRRDEKW WLPVPRVPPG GVGETTRRQL EHKRDCASQI LKAAMAINSN
301: ALAEMDVPDS YLDSLPKNGR ATLGDIIYRY ITSDQFSPDC LLDCLDLSSE YQALEIANRV EASIYVWRRR GTSGAASRAG NKSSWGIVKD MIMDTEKRDD
401: LLADRAEGLL MCLKQRFPGL TQTSLDTSKI QYNKDVGKSI LESYSRVLES LASNIIARID DLLYVDERSR QAELLPTAGA GSGKISCMPA MSASSVPAYP
501: VVSTSGTPPP YATAYATPSF SPAQLSSPSN IGRALLVDRR SHDGRAFDGS MEFMGMAVSN AVFDLPGL

Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)

001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI

Arabidopsis Description

ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.