Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03886 Sorghum cytosol 84.8 84.95
TraesCS3B01G396500.1 Wheat cytosol 81.32 82.37
TraesCS3D01G357800.1 Wheat cytosol 80.95 82.16
TraesCS3A01G364400.1 Wheat nucleus 80.59 81.33
Zm00001d042861_P001 Maize cytosol 82.6 78.71
GSMUA_Achr9P03750_001 Banana cytosol 58.79 68.88
HORVU3Hr1G085680.2 Barley plastid 78.94 66.0
Os05t0454200-01 Rice nucleus 68.5 65.85
PGSC0003DMT400067654 Potato nucleus 57.88 59.4
Solyc08g006550.2.1 Tomato nucleus 57.33 59.06
AT5G02010.1 Thale cress nucleus 55.31 55.31
VIT_13s0019g02710.t01 Wine grape nucleus 60.07 55.03
KRH73109 Soybean nucleus 56.04 54.94
VIT_08s0007g01380.t01 Wine grape nucleus 60.99 54.68
Bra009621.1-P Field mustard nucleus 55.68 54.29
CDY10476 Canola nucleus 55.68 54.29
CDY40325 Canola nucleus 55.31 53.93
Solyc09g011480.2.1 Tomato nucleus 57.33 53.23
KRH00070 Soybean nucleus 59.16 52.69
KRG97804 Soybean nucleus 56.23 51.77
KRH31060 Soybean nucleus 56.59 51.67
KRH15022 Soybean nucleus 52.56 51.16
Bra009152.1-P Field mustard cytosol, plastid 55.13 50.59
KRH75747 Soybean nucleus 54.03 50.43
KRH65969 Soybean nucleus 55.13 49.83
CDY41197 Canola cytosol, plastid 49.63 48.92
AT5G05940.1 Thale cress cytosol 54.4 48.61
CDY40246 Canola cytosol, plastid 49.45 48.47
Os10t0550300-00 Rice plastid 42.49 48.43
Solyc10g086660.1.1 Tomato nucleus 59.89 48.16
AT3G55660.1 Thale cress cytosol, plastid 50.92 48.01
PGSC0003DMT400005554 Potato cytosol, plastid 57.69 47.8
PGSC0003DMT400049230 Potato nucleus 60.44 47.69
CDX70109 Canola cytosol 55.13 47.55
Bra007183.1-P Field mustard cytosol, plastid 49.45 47.29
CDX98888 Canola cytosol 54.95 47.02
Os07t0481100-01 Rice cytosol 39.38 46.74
Os04t0559100-00 Rice cytosol 15.57 46.7
Os09t0544800-01 Rice nucleus 47.62 46.35
VIT_08s0007g01390.t01 Wine grape nucleus 49.08 45.04
KRH49210 Soybean nucleus, plastid 58.79 44.9
Zm00001d047899_P001 Maize cytosol 22.34 43.88
Os01t0760300-01 Rice plasma membrane 37.55 39.35
Zm00001d023356_P001 Maize cytosol 25.46 39.15
Os02t0272300-01 Rice plasma membrane 36.45 38.79
Zm00001d037119_P001 Maize plastid 30.04 38.05
Os01t0675000-01 Rice mitochondrion 37.18 36.64
Zm00001d049679_P001 Maize plastid 29.49 36.43
Os05t0560100-01 Rice mitochondrion 37.91 36.38
Os02t0702600-02 Rice cytosol 34.25 34.44
GSMUA_Achr6P14950_001 Banana mitochondrion 55.86 22.97
Protein Annotations
Gene3D:1.20.58.2010MapMan:27.4.3.1EntrezGene:4324859ProteinID:BAD82675.1ProteinID:BAF06722.1ProteinID:BAS75230.1
ProteinID:EAZ14152.1GO:GO:0003674GO:GO:0005085GO:GO:0005089GO:GO:0005488GO:GO:0005515
GO:GO:0008150InterPro:IPR005512EnsemblPlantsGene:Os01g0849100EnsemblPlants:Os01t0849100-01PFAM:PF03759InterPro:PRONE_dom
PFscan:PS51334PANTHER:PTHR33101PANTHER:PTHR33101:SF1UniProt:Q5N780InterPro:RopGEFUniParc:UPI000049EAD8
RefSeq:XP_015622383.1SEG:seg::::
Description
small GTPase Rac/ROP guanine nucleotide exchange factor 1Small GTPase Rac/ROP guanine nucleotide exchange factor, Signal transduction (Os01t0849100-01)
Coordinates
chr1:-:36485437..36489944
Molecular Weight (calculated)
60234.0 Da
IEP (calculated)
6.910
GRAVY (calculated)
-0.316
Length
546 amino acids
Sequence
(BLAST)
001: MGSGEEEREA RSEAAFTDSA DGSSSSSDAA SADEWPVTLA APPRKTAACG RVPGAEVVDS SKPHAQKRRA PSSEMEMMKE RFAKLLLGED MSGSGKGVCT
101: ALAIANAITN LCATIFGQLW RLEPLPPEKK AMWRREMGWL LCVSDHIVEL VPTWQSFPDG TRLEVMTSRP RSDLYINLPA LRKLDHMLIE ILDSFRDPEF
201: WYVEQGICAP DCDGSASFRA AFHRRDEKWW LPVPRVPPGG LRDKARKQLQ HKRDCANQIL KAALAINSNA LAEMEVPESY LESLPKNGRA TLGDIIYRYI
301: TSDHFSPECL LDCLDLSTEY QALEIANRVE ASVYVWRRRI AAKPASVLGR ATSGRSSWGM VKDMIIDTEK RELLAERAEG LLICLKQRFP GLTQTSLDMS
401: KIQYNRDVGK SILESYSRVL ESLASNIVAR IDDLLNIDEL NRHAEHFPQG DADCRIACNK AAVPPYQVPA SGTPFVTAYA TPSFSPAQLA SPSKKERSPL
501: GAGRRSYSNR GFGAKKALAI DLVNPEVMGV IISGGKMIDV STTTEL
Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)
001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
Arabidopsis Description
ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.