Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES03886 | Sorghum | cytosol | 84.8 | 84.95 |
TraesCS3B01G396500.1 | Wheat | cytosol | 81.32 | 82.37 |
TraesCS3D01G357800.1 | Wheat | cytosol | 80.95 | 82.16 |
TraesCS3A01G364400.1 | Wheat | nucleus | 80.59 | 81.33 |
Zm00001d042861_P001 | Maize | cytosol | 82.6 | 78.71 |
GSMUA_Achr9P03750_001 | Banana | cytosol | 58.79 | 68.88 |
HORVU3Hr1G085680.2 | Barley | plastid | 78.94 | 66.0 |
Os05t0454200-01 | Rice | nucleus | 68.5 | 65.85 |
PGSC0003DMT400067654 | Potato | nucleus | 57.88 | 59.4 |
Solyc08g006550.2.1 | Tomato | nucleus | 57.33 | 59.06 |
AT5G02010.1 | Thale cress | nucleus | 55.31 | 55.31 |
VIT_13s0019g02710.t01 | Wine grape | nucleus | 60.07 | 55.03 |
KRH73109 | Soybean | nucleus | 56.04 | 54.94 |
VIT_08s0007g01380.t01 | Wine grape | nucleus | 60.99 | 54.68 |
Bra009621.1-P | Field mustard | nucleus | 55.68 | 54.29 |
CDY10476 | Canola | nucleus | 55.68 | 54.29 |
CDY40325 | Canola | nucleus | 55.31 | 53.93 |
Solyc09g011480.2.1 | Tomato | nucleus | 57.33 | 53.23 |
KRH00070 | Soybean | nucleus | 59.16 | 52.69 |
KRG97804 | Soybean | nucleus | 56.23 | 51.77 |
KRH31060 | Soybean | nucleus | 56.59 | 51.67 |
KRH15022 | Soybean | nucleus | 52.56 | 51.16 |
Bra009152.1-P | Field mustard | cytosol, plastid | 55.13 | 50.59 |
KRH75747 | Soybean | nucleus | 54.03 | 50.43 |
KRH65969 | Soybean | nucleus | 55.13 | 49.83 |
CDY41197 | Canola | cytosol, plastid | 49.63 | 48.92 |
AT5G05940.1 | Thale cress | cytosol | 54.4 | 48.61 |
CDY40246 | Canola | cytosol, plastid | 49.45 | 48.47 |
Os10t0550300-00 | Rice | plastid | 42.49 | 48.43 |
Solyc10g086660.1.1 | Tomato | nucleus | 59.89 | 48.16 |
AT3G55660.1 | Thale cress | cytosol, plastid | 50.92 | 48.01 |
PGSC0003DMT400005554 | Potato | cytosol, plastid | 57.69 | 47.8 |
PGSC0003DMT400049230 | Potato | nucleus | 60.44 | 47.69 |
CDX70109 | Canola | cytosol | 55.13 | 47.55 |
Bra007183.1-P | Field mustard | cytosol, plastid | 49.45 | 47.29 |
CDX98888 | Canola | cytosol | 54.95 | 47.02 |
Os07t0481100-01 | Rice | cytosol | 39.38 | 46.74 |
Os04t0559100-00 | Rice | cytosol | 15.57 | 46.7 |
Os09t0544800-01 | Rice | nucleus | 47.62 | 46.35 |
VIT_08s0007g01390.t01 | Wine grape | nucleus | 49.08 | 45.04 |
KRH49210 | Soybean | nucleus, plastid | 58.79 | 44.9 |
Zm00001d047899_P001 | Maize | cytosol | 22.34 | 43.88 |
Os01t0760300-01 | Rice | plasma membrane | 37.55 | 39.35 |
Zm00001d023356_P001 | Maize | cytosol | 25.46 | 39.15 |
Os02t0272300-01 | Rice | plasma membrane | 36.45 | 38.79 |
Zm00001d037119_P001 | Maize | plastid | 30.04 | 38.05 |
Os01t0675000-01 | Rice | mitochondrion | 37.18 | 36.64 |
Zm00001d049679_P001 | Maize | plastid | 29.49 | 36.43 |
Os05t0560100-01 | Rice | mitochondrion | 37.91 | 36.38 |
Os02t0702600-02 | Rice | cytosol | 34.25 | 34.44 |
GSMUA_Achr6P14950_001 | Banana | mitochondrion | 55.86 | 22.97 |
Protein Annotations
Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | EntrezGene:4324859 | ProteinID:BAD82675.1 | ProteinID:BAF06722.1 | ProteinID:BAS75230.1 |
ProteinID:EAZ14152.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0008150 | InterPro:IPR005512 | EnsemblPlantsGene:Os01g0849100 | EnsemblPlants:Os01t0849100-01 | PFAM:PF03759 | InterPro:PRONE_dom |
PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF1 | UniProt:Q5N780 | InterPro:RopGEF | UniParc:UPI000049EAD8 |
RefSeq:XP_015622383.1 | SEG:seg | : | : | : | : |
Description
small GTPase Rac/ROP guanine nucleotide exchange factor 1Small GTPase Rac/ROP guanine nucleotide exchange factor, Signal transduction (Os01t0849100-01)
Coordinates
chr1:-:36485437..36489944
Molecular Weight (calculated)
60234.0 Da
IEP (calculated)
6.910
GRAVY (calculated)
-0.316
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGEEEREA RSEAAFTDSA DGSSSSSDAA SADEWPVTLA APPRKTAACG RVPGAEVVDS SKPHAQKRRA PSSEMEMMKE RFAKLLLGED MSGSGKGVCT
101: ALAIANAITN LCATIFGQLW RLEPLPPEKK AMWRREMGWL LCVSDHIVEL VPTWQSFPDG TRLEVMTSRP RSDLYINLPA LRKLDHMLIE ILDSFRDPEF
201: WYVEQGICAP DCDGSASFRA AFHRRDEKWW LPVPRVPPGG LRDKARKQLQ HKRDCANQIL KAALAINSNA LAEMEVPESY LESLPKNGRA TLGDIIYRYI
301: TSDHFSPECL LDCLDLSTEY QALEIANRVE ASVYVWRRRI AAKPASVLGR ATSGRSSWGM VKDMIIDTEK RELLAERAEG LLICLKQRFP GLTQTSLDMS
401: KIQYNRDVGK SILESYSRVL ESLASNIVAR IDDLLNIDEL NRHAEHFPQG DADCRIACNK AAVPPYQVPA SGTPFVTAYA TPSFSPAQLA SPSKKERSPL
501: GAGRRSYSNR GFGAKKALAI DLVNPEVMGV IISGGKMIDV STTTEL
101: ALAIANAITN LCATIFGQLW RLEPLPPEKK AMWRREMGWL LCVSDHIVEL VPTWQSFPDG TRLEVMTSRP RSDLYINLPA LRKLDHMLIE ILDSFRDPEF
201: WYVEQGICAP DCDGSASFRA AFHRRDEKWW LPVPRVPPGG LRDKARKQLQ HKRDCANQIL KAALAINSNA LAEMEVPESY LESLPKNGRA TLGDIIYRYI
301: TSDHFSPECL LDCLDLSTEY QALEIANRVE ASVYVWRRRI AAKPASVLGR ATSGRSSWGM VKDMIIDTEK RELLAERAEG LLICLKQRFP GLTQTSLDMS
401: KIQYNRDVGK SILESYSRVL ESLASNIVAR IDDLLNIDEL NRHAEHFPQG DADCRIACNK AAVPPYQVPA SGTPFVTAYA TPSFSPAQLA SPSKKERSPL
501: GAGRRSYSNR GFGAKKALAI DLVNPEVMGV IISGGKMIDV STTTEL
001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI
Arabidopsis Description
ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.