Factsheet for HORVU3Hr1G085680.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G396500.1	Wheat	cytosol	77.18	93.51
TraesCS3D01G357800.1	Wheat	cytosol	76.57	92.94
TraesCS3A01G364400.1	Wheat	nucleus	76.88	92.79
EES03886	Sorghum	cytosol	66.62	79.82
Os01t0849100-01	Rice	cytosol	66.0	78.94
Zm00001d042861_P001	Maize	cytosol	65.08	74.17
GSMUA_Achr9P03750_001	Banana	cytosol	47.17	66.09
HORVU1Hr1G072910.3	Barley	cytosol	56.51	65.43
PGSC0003DMT400067654	Potato	nucleus	48.39	59.4
Solyc08g006550.2.1	Tomato	nucleus	47.93	59.06
AT5G02010.1	Thale cress	nucleus	45.94	54.95
VIT_13s0019g02710.t01	Wine grape	nucleus	49.31	54.03
CDY10476	Canola	nucleus	46.25	53.93
CDY40325	Canola	nucleus	46.09	53.75
Bra009621.1-P	Field mustard	nucleus	46.09	53.75
VIT_08s0007g01380.t01	Wine grape	nucleus	49.77	53.37
KRH73109	Soybean	nucleus	45.02	52.78
Solyc09g011480.2.1	Tomato	nucleus	46.25	51.36
KRH00070	Soybean	nucleus	47.47	50.57
KRG97804	Soybean	nucleus	45.64	50.25
KRH31060	Soybean	nucleus	45.79	50.0
Bra009152.1-P	Field mustard	cytosol, plastid	45.33	49.75
KRH15022	Soybean	nucleus	42.42	49.38
AT5G05940.1	Thale cress	cytosol	45.48	48.61
Solyc10g086660.1.1	Tomato	nucleus	50.38	48.45
KRH75747	Soybean	nucleus	43.34	48.38
PGSC0003DMT400049230	Potato	nucleus	51.0	48.12
KRH65969	Soybean	nucleus	44.41	48.01
CDY41197	Canola	cytosol, plastid	40.43	47.65
CDY40246	Canola	cytosol, plastid	40.43	47.4
AT3G55660.1	Thale cress	cytosol, plastid	41.81	47.15
PGSC0003DMT400005554	Potato	cytosol, plastid	47.32	46.89
CDX70109	Canola	cytosol	45.33	46.76
CDX98888	Canola	cytosol	45.33	46.4
Bra007183.1-P	Field mustard	cytosol, plastid	40.43	46.23
HORVU1Hr1G053350.4	Barley	nucleus, plastid	33.84	46.23
HORVU6Hr1G092860.2	Barley	nucleus	32.16	45.95
KRH49210	Soybean	nucleus, plastid	49.92	45.59
HORVU5Hr1G085510.1	Barley	nucleus, plastid	37.67	43.46
VIT_08s0007g01390.t01	Wine grape	nucleus	39.51	43.36
Zm00001d047899_P001	Maize	cytosol	18.38	43.17
HORVU2Hr1G096430.13	Barley	mitochondrion	34.15	42.0
HORVU3Hr1G073200.1	Barley	nucleus	29.1	39.92
Zm00001d023356_P001	Maize	cytosol	20.83	38.31
HORVU6Hr1G050860.4	Barley	mitochondrion	29.4	38.17
Zm00001d037119_P001	Maize	plastid	24.04	36.43
Zm00001d049679_P001	Maize	plastid	23.74	35.07
HORVU3Hr1G062030.1	Barley	nucleus, plastid	31.85	33.49
HORVU1Hr1G086590.2	Barley	plastid	31.09	30.12
HORVU6Hr1G068660.4	Barley	nucleus	26.19	28.26
HORVU6Hr1G041610.18	Barley	plastid	27.72	24.13
GSMUA_Achr6P14950_001	Banana	mitochondrion	44.72	21.99

Protein Annotations

EnsemblPlants:HORVU3Hr1G085680.2	EnsemblPlantsGene:HORVU3Hr1G085680	Gene3D:1.20.58.2010	GO:GO:0003674	GO:GO:0005085	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	InterPro:IPR005512	InterPro:PRONE_dom	InterPro:RopGEF
PANTHER:PTHR33101	PANTHER:PTHR33101:SF1	PFAM:PF03759	PFscan:PS51334	SEG:seg	UniParc:UPI000B47D067
UniProt:A0A287M1Z4	MapMan:27.4.3.1	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:613627042..613630620

Molecular Weight (calculated)

71818.1 Da

IEP (calculated)

9.621

GRAVY (calculated)

-0.416

Length

653 amino acids

Sequence
(BLAST)

001: PPAHPVPSPP PTLPGYPPLS KVNPSSSSQQ NPTVTLPHRP TQPARHAFPS LPSLRHCFRS FQDDKTRGGL RSARSPRTRQ PIPLLPRVPS RSPRAELNPA
101: AGRGTERQRR RGAAPGPGAL GAMGSEAFTD SADGSSSSSD AASTDDWPAL ALAPKKAPAC GAPDAEMNGK LKRRPGPEME MMKERFAKLL LGEDMSGSGK
201: GVCTALAIAN AITNLCATIF GQLWRLEPLP PEKKAMWRRE MDWLLCISDH IVELVPTWQS FPDGTRLEIM TSRPRSDLYI NLPALRKLDH MLLVSFSQEI
301: LDSFRDTEFW YVDQGICAAD CDGSASFRAA FHRRDDKWWL PVPRVPPGGL RDKTRKQLQH KRDCANQILK AAMAINSNAL AEMDVPESYL NSLPKNGRAT
401: LGDVIYRYIT SDHFSPECLL NSLDLSTEYQ ALEIASRVEA SVYVWRRRVP AKPVNGLGRT ASARSWSMVK DMLMDSEKRE LLAERAEGLL ICLKQRFPAL
501: TQTSLDMSKI QYNKDVGKSI LESYSRVLES LASNIVARID DLLNIDELNR HVEQLSTGEA DLKMACGRVV VPPYQQVPAS GAPFVTAYTT PSFSPGRLSS
601: PRTSLSAGRR SHGNKVAAAA TKKALTDHLG PEVRGMIIVN RSTMIDVSTT TDM

Best Arabidopsis Sequence Match ( AT5G05940.1 )
(BLAST)

001: MENLVKSCAG IEKKRSNLTP SMEDILTESK ERSSTSGASY ESSSTTTVAS SSPPPPPSQI LGWPIRKASF RKNSKESVNF DHKKLTLHDD SGFKAKEMNS
101: ADVEMMKERF AKLLLGEDMS GSGKGVCTAL AISNAITNLC ATIFGQLWRL EPLSSEKKEM WRREMEWILS VSDHIVELTP STQTYPDGNK FEVMTCRPRF
201: DLFINLPALR KLDNMLLDIL ASFKKTEFWY VDQGIVASEN DGSASFRRKI QRQEEKWWLP VPRLAPNGLT EEARTELNHK RECATQILKA AMAINSLALT
301: EMDVPKSYLE TLPKNGRSCL GDVIYRYVTS DKFSAESLLD CLDLSSEHIA LDIANRVEAS IYVWRRRVQT KLGVNNNTSS TTPKLTWEMV KELMAAGDKR
401: GLLVERSETL LRCLKQRFPS LTQTSLDISK IQWNKDIGKS ILESYSRALE SLASNIIARI DDLLYVDDLT KQSDDNNLLS SPAVSSIIAH KKVVPLPYLI
501: SASGTPYRTS FSTTPGFSPS MISPKKGERR TPYSSKDTNK IIEKGLPSRG YGVRRVLNNY LGMESKLKIC VNPSDNADTA VINQISKDVE EEKKRNSTSV
601: HQKGPPKYTV S

Arabidopsis Description

ROPGEF5Rop guanine nucleotide exchange factor 5 [Source:UniProtKB/Swiss-Prot;Acc:F4K295]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.