Factsheet for Os02t0702600-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G298000.1	Wheat	cytosol	87.29	87.29
TraesCS6D01G244200.1	Wheat	cytosol	87.11	87.11
TraesCS6A01G270900.1	Wheat	cytosol	86.92	86.92
KXG30927	Sorghum	cytosol	86.37	86.85
Zm00001d017755_P002	Maize	cytosol	84.71	85.03
Zm00001d051553_P004	Maize	cytosol	82.32	82.78
HORVU6Hr1G068660.4	Barley	nucleus	76.06	68.26
GSMUA_Achr11P...	Banana	cytosol	40.15	65.27
GSMUA_Achr8P14480_001	Banana	nucleus	30.2	63.32
CDY69871	Canola	cytosol	11.79	57.14
HORVU6Hr1G041610.18	Barley	plastid	76.06	55.07
GSMUA_Achr8P14490_001	Banana	cytosol	18.97	53.65
KRH07751	Soybean	cytosol, nucleus, plastid	52.3	51.17
KRH07240	Soybean	cytosol, nucleus, plastid	51.93	50.72
KRH76428	Soybean	mitochondrion, nucleus	51.38	49.56
KRH39757	Soybean	mitochondrion, nucleus	51.2	49.38
CDX84189	Canola	cytosol	44.38	49.08
GSMUA_Achr11P...	Banana	cytosol	16.39	48.9
Solyc08g075120.2.1	Tomato	extracellular	49.72	47.96
CDY31706	Canola	cytosol	44.38	47.91
Bra005323.1-P	Field mustard	nucleus	44.01	47.7
PGSC0003DMT400053650	Potato	cytosol, nucleus, plastid	49.36	47.6
AT1G31650.1	Thale cress	mitochondrion, nucleus	50.46	47.57
CDY12411	Canola	cytosol	11.23	47.29
CDY62299	Canola	cytosol, nucleus, plastid	48.62	47.14
CDY12303	Canola	nucleus	48.8	47.07
Bra005322.1-P	Field mustard	nucleus	32.23	44.64
PGSC0003DMT400075550	Potato	extracellular	15.84	41.75
Os01t0849100-01	Rice	cytosol	34.44	34.25
Os10t0550300-00	Rice	plastid	29.47	33.4
Os09t0544800-01	Rice	nucleus	34.07	32.98
Os07t0481100-01	Rice	cytosol	27.62	32.61
Os05t0454200-01	Rice	nucleus	34.07	32.57
Solyc12g096220.1.1	Tomato	nucleus	43.65	32.55
Os02t0272300-01	Rice	plasma membrane	30.76	32.55
VIT_02s0087g00460.t01	Wine grape	mitochondrion, nucleus	52.3	31.14
Os01t0675000-01	Rice	mitochondrion	31.49	30.87
Os01t0760300-01	Rice	plasma membrane	29.1	30.33
Os05t0560100-01	Rice	mitochondrion	30.2	28.82
Os04t0559100-00	Rice	cytosol	8.84	26.37

Protein Annotations

Gene3D:1.20.58.2010	MapMan:27.4.3.1	EntrezGene:4330445	EMBL:AK102549	EMBL:AK102962	ProteinID:BAD07555.1
ProteinID:BAD08064.1	ProteinID:BAF09766.1	ProteinID:BAS80486.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005085
GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856
GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0080092
InterPro:IPR005512	EnsemblPlantsGene:Os02g0702600	EnsemblPlants:Os02t0702600-02	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334
PANTHER:PTHR33101	PANTHER:PTHR33101:SF2	UniProt:Q6YVK1	InterPro:RopGEF	UniParc:UPI000023671B	RefSeq:XP_015623328.1
SEG:seg	:	:	:	:	:

Description

guanine nucleotide exchange factor for Rop 4Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-01);Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-02);Similar to predicted protein. (Os02t0702600-03)

Coordinates

chr2:-:28953068..28957981

Molecular Weight (calculated)

60578.9 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.238

Length

543 amino acids

Sequence
(BLAST)

001: MRMKTLACCR RRPQDFSIDM DQEPDRVMTY NGLESCIINS SSYDDDSGLS ATTGADGCVT TDSVDDEVSS CSSSKDVSSS SFSSQCHPLR KQEEHSLYEL
101: DTLSAVHLLP LKGKKPITYT LSASDIETMK EKFGKLLLGD DASGGARGVC AALALSNAII NLSATIFGEL WKLEPLCEEK KVRWRKEMDW LLSPTTYMVE
201: LVPTKQNGAD GCTFEIMTPK ARSDVNVNLP ALQKLDSMLI EVLDSMVDTE YWYVESGSRA NGRGKKNGLR QTKKWWLPSP RVPDIGLSQF QRNRLVFQAK
301: LVHQILKAAM SINEEVLLQI PIPPAVTDAL PKSGRAGLGE DLYHAITTEY IPIEEIFLSL SLKTEHTVLE TMNRLEGAVF AWNQRISEEK SKKSPGRHSW
401: NFMKDSSSEL DKMSMCIERV ETLMQLLKSR FPSLPPTFIE VVKIQYNVDV GHAIVEAYSR VLVGVAFSIL SRVAEILLED DLIKKPNTPL ATLKFDLSSD
501: VYLAGITETP PGHIRRSLMD QISLVDGSLD AVVRKKGVKQ LRW

Best Arabidopsis Sequence Match ( AT1G31650.1 )
(BLAST)

001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP

Arabidopsis Description

ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.