Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69871 | Canola | cytosol | 21.18 | 92.86 |
| CDY31706 | Canola | cytosol | 94.3 | 92.05 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 68.64 | 60.18 |
| CDY12303 | Canola | nucleus | 68.02 | 59.33 |
| CDY12411 | Canola | cytosol | 14.87 | 56.59 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 29.12 | 55.21 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 59.67 | 52.79 |
| KRH39757 | Soybean | mitochondrion, nucleus | 60.08 | 52.4 |
| KRH76428 | Soybean | mitochondrion, nucleus | 59.88 | 52.22 |
| Solyc08g075120.2.1 | Tomato | extracellular | 59.67 | 52.04 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 58.86 | 51.98 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 58.86 | 51.33 |
| GSMUA_Achr11P... | Banana | cytosol | 34.01 | 50.0 |
| KXG30927 | Sorghum | cytosol | 49.29 | 44.81 |
| Os02t0702600-02 | Rice | cytosol | 49.08 | 44.38 |
| Zm00001d017755_P002 | Maize | cytosol | 48.88 | 44.36 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 48.88 | 44.2 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 48.88 | 44.2 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 48.88 | 44.2 |
| Zm00001d051553_P004 | Maize | cytosol | 48.07 | 43.7 |
| PGSC0003DMT400075550 | Potato | extracellular | 18.33 | 43.69 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 16.5 | 42.19 |
| Solyc12g096220.1.1 | Tomato | nucleus | 53.56 | 36.13 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 44.2 | 35.87 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 5.3 | 34.67 |
| CDX92519 | Canola | plastid | 34.01 | 33.6 |
| CDY70620 | Canola | nucleus | 31.57 | 33.05 |
| CDY44926 | Canola | nucleus | 32.99 | 32.79 |
| CDX67930 | Canola | nucleus | 32.38 | 32.65 |
| CDY42277 | Canola | nucleus | 32.59 | 32.39 |
| CDX88884 | Canola | cytosol, plastid | 32.18 | 32.38 |
| CDY07216 | Canola | cytosol | 31.16 | 32.21 |
| CDY18892 | Canola | nucleus | 29.53 | 32.08 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 59.27 | 31.91 |
| CDY51157 | Canola | nucleus | 29.53 | 31.87 |
| CDX74772 | Canola | nucleus, plastid | 29.12 | 31.78 |
| CDY58963 | Canola | cytosol | 24.03 | 31.72 |
| CDX70882 | Canola | cytosol | 32.38 | 31.49 |
| CDY03297 | Canola | mitochondrion | 32.79 | 30.78 |
| CDY39783 | Canola | mitochondrion | 32.79 | 30.67 |
| CDX77402 | Canola | nucleus | 32.38 | 30.52 |
| CDY46477 | Canola | nucleus | 32.38 | 30.52 |
| CDX77457 | Canola | cytosol | 33.6 | 30.16 |
| CDX85176 | Canola | cytosol | 33.4 | 29.98 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 32.38 | 29.61 |
| CDY10476 | Canola | nucleus | 33.4 | 29.29 |
| GSMUA_Achr11P... | Banana | cytosol | 10.79 | 29.12 |
| CDY40325 | Canola | nucleus | 33.2 | 29.11 |
| CDY40246 | Canola | cytosol, plastid | 32.99 | 29.08 |
| CDY41197 | Canola | cytosol, plastid | 32.79 | 29.06 |
| CDX97723 | Canola | nucleus | 31.36 | 28.95 |
| HORVU6Hr1G041610.18 | Barley | plastid | 44.2 | 28.93 |
| CDY45633 | Canola | nucleus | 30.55 | 28.68 |
| CDY03296 | Canola | nucleus | 19.14 | 28.4 |
| CDY30136 | Canola | nucleus | 31.77 | 28.36 |
| CDX87879 | Canola | nucleus | 30.75 | 27.11 |
| CDX70109 | Canola | cytosol | 33.6 | 26.07 |
| CDX98888 | Canola | cytosol | 33.6 | 25.86 |
| CDY67259 | Canola | nucleus | 31.16 | 25.46 |
| CDY52982 | Canola | nucleus | 31.16 | 25.46 |
| CDY28381 | Canola | nucleus | 30.96 | 25.38 |
| CDY20181 | Canola | nucleus | 30.96 | 25.04 |
| CDX91908 | Canola | cytosol | 31.36 | 23.51 |
| CDX93028 | Canola | nucleus | 20.16 | 20.89 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078D728 | EnsemblPlants:CDX84189 | ProteinID:CDX84189 | ProteinID:CDX84189.1 |
| GO:GO:0003674 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00141238001 | InterPro:IPR005512 |
| PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | InterPro:RopGEF |
| UniParc:UPI0004EDF65F | SEG:seg | : | : | : | : |
Description
BnaC04g09510D
Coordinates
chrLK031836:-:636261..638099
Molecular Weight (calculated)
55463.9 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.554
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYDGLETCI NKNSNLSLQE ESGRSRGDEC LTDSLGDDAF SSCSSSKDTS ESFSSKWLPK KNGEHISNEW DYERSPKHFY SKEERPGYTL CSSDVEAMKE
101: KFSKLLLGGD LTGGRKGVQT ALALSNSISH LANSVFGELW KLEPLSEDNK QRWRREMDWL LSPCNHMIEL VPSKLDDKNG RSLEIMTPKP RADIHMNLPA
201: LRKLDSMLIE TLDSMVNTEF WYSEVGRRAE SRRWWLPSPK VPKPGLSSLV RKNLLEKGNV VYQSFKAAKS INGEVLLEMP VPTIIKDSLP KSGKTRLGDE
301: LFRMLASESA SVDEIFVSLR LRTEHAALET VNRLESAIYA WKEKIIEETS SGKWSLVRDS LSEISRIESL INKAERLNGQ IKSKYSNLPQ TFLDATKIQY
401: GKDIGHAILE AYSRILASLA FRILSRIREI LQEDALSNSS SPATPRCFSG SNDMFRTPER LLVSSRLRHS LIHDINKADD GTRKSRLSTD S
101: KFSKLLLGGD LTGGRKGVQT ALALSNSISH LANSVFGELW KLEPLSEDNK QRWRREMDWL LSPCNHMIEL VPSKLDDKNG RSLEIMTPKP RADIHMNLPA
201: LRKLDSMLIE TLDSMVNTEF WYSEVGRRAE SRRWWLPSPK VPKPGLSSLV RKNLLEKGNV VYQSFKAAKS INGEVLLEMP VPTIIKDSLP KSGKTRLGDE
301: LFRMLASESA SVDEIFVSLR LRTEHAALET VNRLESAIYA WKEKIIEETS SGKWSLVRDS LSEISRIESL INKAERLNGQ IKSKYSNLPQ TFLDATKIQY
401: GKDIGHAILE AYSRILASLA FRILSRIREI LQEDALSNSS SPATPRCFSG SNDMFRTPER LLVSSRLRHS LIHDINKADD GTRKSRLSTD S
001: MITYYGLETC IINNQSYEEE SGTSRGDGCL TDSLDDDAFS SCSSSKDASS SFSSKWLPMK NDEHSCDGLN LSGRSQHFDA KEKKKQGYGS SQHFDAKEKP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
101: GYVYCHLDVE AMKEKFSKLL LGEDVTGGCK GVQVALALSN AVTHLATSIF GELWKLEPLC EEKKQKWRRE MDWLLSPTNY MIELVPSKQN DANGRSLEIM
201: TPKARADIHM NLPALQKLDS MLIETLDSMV NTEFWYSEIG SRAEGKNKST SESKRWWLPS PQVPKPGLSN SGRKKLLDKG KVVYQVFKAT KAINENILLE
301: MPVPIVIKEA IPKSGKNSLG DELYKMLAVE SATVDEIFIS LNLGTEHAAL ETVNKLESAM FAWKERITEQ GSNGKSPVRA SWSFAKDPLS EIGRNESLLN
401: RAEALRTQIK SKHPNLPHSF LDATKIQYDK DIGHAVLEAY SRTLANLAFR ILSRMGEILK EDSLSNPNSP APPSCFPSSR DPYRTPERPL LSSRVRHSLT
501: DDMNKADGTE TGLDFLFADA KASNSVNTTP SRSSRLWCLS KVPSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.