CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006510.1-P	Field mustard	cytosol	94.85	98.16
CDX88884	Canola	cytosol, plastid	94.46	97.75
CDY44926	Canola	nucleus	74.26	75.91
CDX92519	Canola	plastid	74.65	75.86
CDY58963	Canola	cytosol	55.45	75.27
CDY42277	Canola	nucleus	73.47	75.1
AT5G19560.4	Thale cress	mitochondrion	74.65	73.63
GSMUA_Achr2P09130_001	Banana	cytosol	45.54	58.82
GSMUA_Achr5P06900_001	Banana	cytosol	48.51	58.19
GSMUA_Achr6P14020_001	Banana	cytosol	49.51	58.0
TraesCS6A01G196000.1	Wheat	cytosol	49.7	57.57
GSMUA_Achr4P10530_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	48.12	56.38
OQU84790	Sorghum	cytosol	48.91	56.14
CDY03296	Canola	nucleus	35.84	54.68
TraesCSU01G211800.1	Wheat	cytosol	34.26	53.07
TraesCSU01G211700.1	Wheat	cytosol	34.85	51.76
TraesCSU01G217800.1	Wheat	cytosol	34.85	51.76
Zm00001d053307_P002	Maize	cytosol, plastid	49.51	51.76
CDY46477	Canola	nucleus	53.27	51.63
CDX77402	Canola	nucleus	53.27	51.63
CDY03297	Canola	mitochondrion	53.47	51.63
CDY39783	Canola	mitochondrion	53.47	51.43
GSMUA_Achr3P03410_001	Banana	nucleus	51.29	51.19
Os02t0272300-01	Rice	plasma membrane	51.88	51.07
HORVU6Hr1G050860.4	Barley	mitochondrion	50.49	50.7
TraesCS6D01G183300.1	Wheat	mitochondrion	50.69	50.29
CDX67930	Canola	nucleus	47.52	49.28
GSMUA_Achr3P15410_001	Banana	nucleus	47.33	48.19
Zm00001d016001_P002	Maize	mitochondrion	49.9	47.19
CDY45633	Canola	nucleus	48.71	47.04
VIT_11s0016g03740.t01	Wine grape	nucleus	51.68	47.03
CDX79407	Canola	cytosol, endoplasmic reticulum, nucleus	47.72	44.88
CDY69871	Canola	cytosol	9.9	44.64
CDX87879	Canola	nucleus	48.71	44.17
CDX97723	Canola	nucleus	43.96	41.73
CDY67259	Canola	nucleus	48.71	40.93
CDY52982	Canola	nucleus	48.71	40.93
CDY30136	Canola	nucleus	43.96	40.36
CDY57376	Canola	cytosol, extracellular, nucleus	5.74	38.67
CDX93028	Canola	nucleus	36.24	38.61
CDY18892	Canola	nucleus	33.47	37.39
CDX74772	Canola	nucleus, plastid	33.27	37.33
CDY28381	Canola	nucleus	43.76	36.89
CDY20181	Canola	nucleus	43.56	36.24
CDY70620	Canola	nucleus	33.07	35.61
CDY51157	Canola	nucleus	32.08	35.6
CDY07216	Canola	cytosol	33.27	35.37
CDY12411	Canola	cytosol	8.71	34.11
CDX77457	Canola	cytosol	36.44	33.64
CDX85176	Canola	cytosol	36.24	33.46
CDX84189	Canola	cytosol	31.49	32.38
CDY31706	Canola	cytosol	32.08	32.21
CDY41197	Canola	cytosol, plastid	35.25	32.13
CDY40325	Canola	nucleus	35.45	31.96
CDY10476	Canola	nucleus	35.45	31.96
CDY40246	Canola	cytosol, plastid	35.05	31.78
CDX70109	Canola	cytosol	36.44	29.07
CDY62299	Canola	cytosol, nucleus, plastid	31.88	28.75
CDX98888	Canola	cytosol	36.04	28.53
CDY12303	Canola	nucleus	31.68	28.42
CDX91908	Canola	cytosol	33.07	25.5

Protein Annotations

EnsemblPlants:CDX70882	EnsemblPlantsGene:GSBRNA2T00140780001	Gene3D:1.20.58.2010	GO:A0A078C2E4	GO:GO:0003674	GO:GO:0005089
GO:GO:0005488	GO:GO:0005515	InterPro:IPR005512	InterPro:PRONE_dom	InterPro:RopGEF	PANTHER:PTHR33101
PANTHER:PTHR33101:SF10	PFAM:PF03759	PFscan:PS51334	ProteinID:CDX70882	ProteinID:CDX70882.1	UniParc:UPI0004EE31C1
MapMan:27.4.3.1	:	:	:	:	:

Description

BnaC03g09660D

Coordinates

chrLK031791:+:2559850..2563745

Molecular Weight (calculated)

58165.9 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.583

Length

505 amino acids

Sequence
(BLAST)

001: MFDGRNKGHS SFPSRRDSKQ IPEQELTIHG MNPASSSRRG KQARTSDMEM MRERFAKLLL GEDMSGGEKG VTSALALSNA ITNLADSMFG EHMKLQPMDL
101: KRKKIWRKEM NWLLSVVDHI VQFVPSKQVA KTGDFTEIMV TKKRDDLLMN IPALRKLDSV LLETLDKFKD HKDFWYVQKD VENTENNGNW RKDENWLLPV
201: VKNNGDWRKD ENWLLPVVKV PPDGLSEESR KFLRSQKESV AQVLKAATAI NAQVLSEMHI PDNYIDSLPK KGKTSLGDFL YKSITDEYFD PGYFLSSCDL
301: STKHKVLDLK NRIESSMVIW KRKMNHKEQW GSFVSLEKRE LFEVRVETIL AMLKQKFPEI LQSSLEISKI KNNKDVGHAI LESYSRVLES LAAKIMSRIE
401: DVLEADVLVH IQLMEAERRF ESDAEPEYEK TEKVVLAVTP NSTKLADLIG WRFSSDTEQS STSGIELFHE AEQEKEIMKS PIRVQPMKLS YLAKLENLRS
501: PSERH

Best Arabidopsis Sequence Match ( AT5G19560.5 )
(BLAST)

001: MFDGRNSGHS SFSSRGDGMH TPEHELAGHA APSTRRGKQN RRSDMEVMKE RFAKLLLGED MSGGGTGETS ALALSNAITK LADSMFGEQM KLQPMYPETK
101: ENWRKEMGWL LSVIDHIVQF VPSRQMGKNG QFTEIMVTKQ RDDLLTNIPA LRKLDSVLLE TLDNFKDQKD FWYVPRDMED ADHNGDWRRD ENWWLPVVKV
201: PTDGLSEESR RWLQNQKDSV AQVLKAATAI NAHVLSEMHV PENYIDSLPK NGKTSLGDFL YKSITEESFD PDYFVSFLDL STEHKVLDLK NRIEASMVIW
301: KRKMCQKEKD GKSQWGSTVS LEKRELFEVR AETILVMLKQ QFPGIPQSSL EVSKIKNNKD VGQAILESYS RVLESLASKI MSRIEDVLEA DRLVQRQLMG
401: EAETRSESEA ESEYEETEKV VAAETPNSRK LSDFIGWRLS SDTKKHSSMS DIEFFHKVEQ EKEKPMMKSP RALPKKFSYL AKLENMRSPS DRH

Arabidopsis Description

ATROPGEF10ROP uanine nucleotide exchange factor 10 [Source:TAIR;Acc:AT5G19560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.