Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000971.1-P | Field mustard | nucleus | 99.57 | 97.7 |
| AT4G00460.2 | Thale cress | nucleus | 93.82 | 93.02 |
| CDY51157 | Canola | nucleus | 89.34 | 92.09 |
| CDY07216 | Canola | cytosol | 91.47 | 90.32 |
| CDX91908 | Canola | cytosol | 97.87 | 70.08 |
| Solyc01g094610.2.1 | Tomato | nucleus | 63.11 | 62.05 |
| PGSC0003DMT400000136 | Potato | nucleus | 62.69 | 61.64 |
| CDX74772 | Canola | nucleus, plastid | 56.29 | 58.67 |
| VIT_15s0046g02530.t01 | Wine grape | plastid | 62.9 | 58.53 |
| CDY18892 | Canola | nucleus | 56.08 | 58.19 |
| GSMUA_Achr5P20570_001 | Banana | nucleus | 55.01 | 53.53 |
| EES11256 | Sorghum | nucleus | 53.3 | 53.08 |
| Zm00001d002696_P001 | Maize | cytosol | 52.03 | 52.81 |
| Os10t0550300-00 | Rice | plastid | 53.73 | 52.61 |
| CDY69871 | Canola | cytosol | 12.37 | 51.79 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 52.67 | 51.78 |
| TraesCS1D01G211900.1 | Wheat | nucleus | 52.67 | 51.78 |
| TraesCS1B01G222700.1 | Wheat | plastid | 52.67 | 51.67 |
| TraesCS2B01G426300.1 | Wheat | cytosol | 51.17 | 51.61 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 52.24 | 51.26 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 50.96 | 51.07 |
| TraesCS2D01G405400.1 | Wheat | nucleus | 50.96 | 50.85 |
| EER91970 | Sorghum | plastid | 52.45 | 50.31 |
| Os07t0481100-01 | Rice | cytosol | 49.25 | 50.22 |
| Zm00001d021489_P001 | Maize | nucleus, plastid | 49.47 | 50.0 |
| Zm00001d029850_P001 | Maize | nucleus, plastid | 51.81 | 49.69 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 7.89 | 49.33 |
| EER99384 | Sorghum | nucleus, plastid | 48.61 | 49.24 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 47.76 | 49.02 |
| Os04t0559100-00 | Rice | cytosol | 18.98 | 48.9 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 47.55 | 48.8 |
| TraesCS6D01G388300.1 | Wheat | nucleus | 47.97 | 48.18 |
| TraesCS6B01G449200.1 | Wheat | nucleus | 47.55 | 47.35 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 50.75 | 44.82 |
| CDY10476 | Canola | nucleus | 48.83 | 40.89 |
| CDY40325 | Canola | nucleus | 48.61 | 40.71 |
| CDX77457 | Canola | cytosol | 46.06 | 39.49 |
| CDX85176 | Canola | cytosol | 46.06 | 39.49 |
| CDY41197 | Canola | cytosol, plastid | 44.35 | 37.55 |
| CDY40246 | Canola | cytosol, plastid | 44.14 | 37.16 |
| CDX67930 | Canola | nucleus | 37.95 | 36.55 |
| CDY12411 | Canola | cytosol | 10.02 | 36.43 |
| CDX70109 | Canola | cytosol | 47.97 | 35.55 |
| CDX98888 | Canola | cytosol | 47.76 | 35.11 |
| CDY45633 | Canola | nucleus | 39.02 | 34.99 |
| CDY03297 | Canola | mitochondrion | 38.81 | 34.8 |
| CDX77402 | Canola | nucleus | 38.59 | 34.74 |
| CDY46477 | Canola | nucleus | 38.59 | 34.74 |
| CDY39783 | Canola | mitochondrion | 38.81 | 34.67 |
| CDY03296 | Canola | nucleus | 24.09 | 34.14 |
| CDX88884 | Canola | cytosol, plastid | 35.39 | 34.02 |
| CDY42277 | Canola | nucleus | 35.39 | 33.6 |
| CDY44926 | Canola | nucleus | 35.39 | 33.6 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 38.38 | 33.52 |
| CDX70882 | Canola | cytosol | 35.61 | 33.07 |
| CDX87879 | Canola | nucleus | 39.02 | 32.85 |
| CDX92519 | Canola | plastid | 34.54 | 32.6 |
| CDX97723 | Canola | nucleus | 36.67 | 32.33 |
| CDY30136 | Canola | nucleus | 37.31 | 31.82 |
| CDX84189 | Canola | cytosol | 33.05 | 31.57 |
| CDY58963 | Canola | cytosol | 24.95 | 31.45 |
| CDY31706 | Canola | cytosol | 33.26 | 31.01 |
| CDY67259 | Canola | nucleus | 38.38 | 29.95 |
| CDY52982 | Canola | nucleus | 38.17 | 29.78 |
| CDY28381 | Canola | nucleus | 36.89 | 28.88 |
| CDY20181 | Canola | nucleus | 36.89 | 28.5 |
| CDY12303 | Canola | nucleus | 34.12 | 28.42 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 33.69 | 28.21 |
| CDX93028 | Canola | nucleus | 25.37 | 25.11 |
Protein Annotations
| Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | GO:A0A078JVY0 | UniProt:A0A078JVY0 | EnsemblPlants:CDY70620 | ProteinID:CDY70620 |
| ProteinID:CDY70620.1 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00004844001 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom |
| PFscan:PS51334 | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF9 | InterPro:RopGEF | UniParc:UPI0004EF4CBB | : |
Description
BnaAnng34400DBnaAnng34400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVY0]
Coordinates
chrLK042715:+:1104..3031
Molecular Weight (calculated)
52952.6 Da
IEP (calculated)
4.586
GRAVY (calculated)
-0.441
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLSNPDEN EDANYHQSPR SIDQNDQSAS ETPVYSSMSI DSFVYPRTCS ESTSGFSDQI DHETNSFCSD ASPSDWPVLT ESKSSKCLST GLDMQSNENL
101: QVQEISEAEL ETMKERFSKL LLGEDMSGSG KGVCTAVTIS NAITNLYATV FGQNLRLEPL ETEKRALWKR EMKCLLSVCD YIVEFIPRCQ SLSNGTTVEV
201: MESRPRADIY INLPALRKLD SMLMEALDSF QNTEFWYAEE GSLSMKSALI VQRKEEKWWL PVPLVPPEGL SDIARKQLKN KRESTNQIHK AAMAINSSIL
301: SEMEIPDSYM ATLPKCGKSS VGDSIYRYMS GSGRFFPEKL LDCLNIASEH EAVQLADRVE ASMYTWRRKA CLSNSKNSWN LVKDLMSTTE RTDKNYVMAE
401: RAETLLFCLK QRYPELSQTS LDICKIQYNK DVGKAVLESY SRVLEGLAFN IVAWIDDVLY VDKTMSGSE
101: QVQEISEAEL ETMKERFSKL LLGEDMSGSG KGVCTAVTIS NAITNLYATV FGQNLRLEPL ETEKRALWKR EMKCLLSVCD YIVEFIPRCQ SLSNGTTVEV
201: MESRPRADIY INLPALRKLD SMLMEALDSF QNTEFWYAEE GSLSMKSALI VQRKEEKWWL PVPLVPPEGL SDIARKQLKN KRESTNQIHK AAMAINSSIL
301: SEMEIPDSYM ATLPKCGKSS VGDSIYRYMS GSGRFFPEKL LDCLNIASEH EAVQLADRVE ASMYTWRRKA CLSNSKNSWN LVKDLMSTTE RTDKNYVMAE
401: RAETLLFCLK QRYPELSQTS LDICKIQYNK DVGKAVLESY SRVLEGLAFN IVAWIDDVLY VDKTMSGSE
001: MENLSNPDEN DDHQSPRSID QNDQSAVETP VYSTMSIDSF VYPRTCSETT SGFSDQIDET NSFCSEASPC NWPVLTESKS SKCLSGLEMQ SNECLVVQEI
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
101: SEPELETMKE RFAKLLLGED MSGSGKGVCT AVTISNAITN LYATVFGQNL RLEPLETEKR ALWKREMNCL LSVCDYIVEF IPRCQNLSNG ATVEVMESRP
201: RADIYINLPA LRKLDSMLME ALDSFQNTEF WYAEEGSLSM KSARSSTGSF RKVIVQRKEE KWWLPVPLVP SEGLSDKARK QLKNKRESTN QIHKAAMAIN
301: SSILSEMEIP DSYMTTLPKC GKSSVGDSIY RYMSGSGRFF PEQLLDCLNI SSEHEAVQLA DRVEASMYTW RRKSCLSNSK NSWNMVKDLM STTERTDKNY
401: VMAERAETLL FCLKQRYPEL SQTSLDICKI QYNKDVGKAV LESYSRVLEG LAFNIVAWID DVLYVDKTMR GSE
Arabidopsis Description
ROPGEF3Rop guanine nucleotide exchange factor 3 [Source:UniProtKB/Swiss-Prot;Acc:A4IJ27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.