Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69871 | Canola | cytosol | 48.84 | 56.25 |
| GSMUA_Achr11P... | Banana | cytosol | 45.74 | 17.66 |
| CDY12303 | Canola | nucleus | 75.97 | 17.41 |
| CDY62299 | Canola | cytosol, nucleus, plastid | 75.19 | 17.32 |
| GSMUA_Achr8P14480_001 | Banana | nucleus | 33.33 | 16.6 |
| AT1G31650.1 | Thale cress | mitochondrion, nucleus | 72.09 | 16.15 |
| CDY57376 | Canola | cytosol, extracellular, nucleus | 9.3 | 16.0 |
| CDY31706 | Canola | cytosol | 58.91 | 15.11 |
| CDX84189 | Canola | cytosol | 56.59 | 14.87 |
| KRH39757 | Soybean | mitochondrion, nucleus | 63.57 | 14.56 |
| KRH76428 | Soybean | mitochondrion, nucleus | 63.57 | 14.56 |
| PGSC0003DMT400053650 | Potato | cytosol, nucleus, plastid | 61.24 | 14.03 |
| Solyc08g075120.2.1 | Tomato | extracellular | 60.47 | 13.85 |
| KRH07751 | Soybean | cytosol, nucleus, plastid | 57.36 | 13.33 |
| KRH07240 | Soybean | cytosol, nucleus, plastid | 56.59 | 13.13 |
| KXG30927 | Sorghum | cytosol | 49.61 | 11.85 |
| Zm00001d017755_P002 | Maize | cytosol | 49.61 | 11.83 |
| Zm00001d051553_P004 | Maize | cytosol | 48.84 | 11.67 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 48.84 | 11.6 |
| TraesCS6B01G298000.1 | Wheat | cytosol | 48.84 | 11.6 |
| TraesCS6D01G244200.1 | Wheat | cytosol | 48.84 | 11.6 |
| CDY58963 | Canola | cytosol | 33.33 | 11.56 |
| Os02t0702600-02 | Rice | cytosol | 47.29 | 11.23 |
| CDY51157 | Canola | nucleus | 37.21 | 10.55 |
| CDY07216 | Canola | cytosol | 37.21 | 10.11 |
| CDY70620 | Canola | nucleus | 36.43 | 10.02 |
| CDY03296 | Canola | nucleus | 25.58 | 9.97 |
| CDX74772 | Canola | nucleus, plastid | 34.11 | 9.78 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 45.74 | 9.75 |
| CDY18892 | Canola | nucleus | 34.11 | 9.73 |
| CDX67930 | Canola | nucleus | 34.88 | 9.24 |
| CDY44926 | Canola | nucleus | 34.88 | 9.11 |
| CDY42277 | Canola | nucleus | 34.88 | 9.11 |
| CDX88884 | Canola | cytosol, plastid | 34.11 | 9.02 |
| CDY03297 | Canola | mitochondrion | 36.43 | 8.99 |
| CDY39783 | Canola | mitochondrion | 36.43 | 8.95 |
| Solyc12g096220.1.1 | Tomato | nucleus | 50.39 | 8.93 |
| CDX92519 | Canola | plastid | 34.11 | 8.85 |
| CDX77402 | Canola | nucleus | 35.66 | 8.83 |
| CDY46477 | Canola | nucleus | 35.66 | 8.83 |
| CDX70882 | Canola | cytosol | 34.11 | 8.71 |
| VIT_02s0087g00460.t01 | Wine grape | mitochondrion, nucleus | 60.47 | 8.55 |
| CDY45633 | Canola | nucleus | 34.11 | 8.41 |
| CDX77457 | Canola | cytosol | 35.66 | 8.41 |
| CDX85176 | Canola | cytosol | 34.88 | 8.23 |
| CDX79407 | Canola | cytosol, endoplasmic reticulum, nucleus | 34.11 | 8.19 |
| CDY41197 | Canola | cytosol, plastid | 34.11 | 7.94 |
| CDY40246 | Canola | cytosol, plastid | 34.11 | 7.9 |
| CDX87879 | Canola | nucleus | 34.11 | 7.9 |
| HORVU6Hr1G041610.18 | Barley | plastid | 45.74 | 7.87 |
| GSMUA_Achr8P14490_001 | Banana | cytosol | 11.63 | 7.81 |
| CDY10476 | Canola | nucleus | 32.56 | 7.5 |
| CDY40325 | Canola | nucleus | 31.78 | 7.32 |
| CDX91908 | Canola | cytosol | 36.43 | 7.18 |
| CDY67259 | Canola | nucleus | 33.33 | 7.15 |
| CDY52982 | Canola | nucleus | 33.33 | 7.15 |
| CDY30136 | Canola | nucleus | 30.23 | 7.09 |
| CDX97723 | Canola | nucleus | 28.68 | 6.95 |
| CDX70109 | Canola | cytosol | 34.11 | 6.95 |
| CDX98888 | Canola | cytosol | 34.11 | 6.9 |
| CDY28381 | Canola | nucleus | 29.46 | 6.34 |
| CDY20181 | Canola | nucleus | 29.46 | 6.26 |
| CDX93028 | Canola | nucleus | 21.71 | 5.91 |
| PGSC0003DMT400075550 | Potato | extracellular | 6.2 | 3.88 |
| GSMUA_Achr11P... | Banana | cytosol | 3.1 | 2.2 |
Protein Annotations
| EnsemblPlants:CDY12411 | EnsemblPlantsGene:GSBRNA2T00061652001 | Gene3D:1.20.58.2010 | GO:A0A078FGT2 | GO:GO:0003674 | GO:GO:0005085 |
| GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | InterPro:IPR005512 |
| InterPro:PRONE_dom | InterPro:RopGEF | PANTHER:PTHR33101 | PANTHER:PTHR33101:SF2 | PFAM:PF03759 | PFscan:PS51334 |
| ProteinID:CDY12411 | ProteinID:CDY12411.1 | UniParc:UPI0004EE7F98 | UniProt:A0A078FGT2 | MapMan:35.1 | : |
Description
BnaC08g09000DBnaC08g09000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGT2]
Coordinates
chrLK032022:+:60262..61390
Molecular Weight (calculated)
14464.9 Da
IEP (calculated)
10.527
GRAVY (calculated)
-0.460
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDLTRSHIM TPKARADIHM NLPALQKLDS MLMEPAVELK GQNRTTSESK RWWLPSPQVP KPGLSNSARK KLLDKGKVVY KVFKATKSIN ENVLLEMPVP
101: AIIKEAIPKE GSFEPGLGMQ VDSRTKPLD
101: AIIKEAIPKE GSFEPGLGMQ VDSRTKPLD
001: MMLMRRRLAC CSREREISID FDEHEQDKMI TYYGLETCII NNQSYEEESG TSRGDGCLTD SLDDDAFSSC SSSKDASSSF SSKWLPMKND EHSCDGLNLS
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
101: GRSQHFDAKE KKKQGYGSSQ HFDAKEKPGY VYCHLDVEAM KEKFSKLLLG EDVTGGCKGV QVALALSNAV THLATSIFGE LWKLEPLCEE KKQKWRREMD
201: WLLSPTNYMI ELVPSKQNDA NGRSLEIMTP KARADIHMNL PALQKLDSML IETLDSMVNT EFWYSEIGSR AEGKNKSTSE SKRWWLPSPQ VPKPGLSNSG
301: RKKLLDKGKV VYQVFKATKA INENILLEMP VPIVIKEAIP KSGKNSLGDE LYKMLAVESA TVDEIFISLN LGTEHAALET VNKLESAMFA WKERITEQGS
401: NGKSPVRASW SFAKDPLSEI GRNESLLNRA EALRTQIKSK HPNLPHSFLD ATKIQYDKDI GHAVLEAYSR TLANLAFRIL SRMGEILKED SLSNPNSPAP
501: PSCFPSSRDP YRTPERPLLS SRVRHSLTDD MNKADGTETG LDFLFADAKA SNSVNTTPSR SSRLWCLSKV PSDTSP
Arabidopsis Description
ROPGEF14Rop guanine nucleotide exchange factor 14 [Source:UniProtKB/Swiss-Prot;Acc:Q56WM6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.