Factsheet for Zm00001d010062_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18335	Sorghum	cytosol	80.94	79.69
TraesCS1D01G280000.1	Wheat	cytosol	71.92	74.24
HORVU1Hr1G072910.3	Barley	cytosol	72.27	73.94
TraesCS1B01G289900.1	Wheat	cytosol	72.44	73.85
Os05t0454200-01	Rice	nucleus	71.06	72.18
TraesCS1A01G280900.2	Wheat	cytosol	71.06	69.61
Zm00001d042861_P001	Maize	cytosol	63.95	64.4
GSMUA_Achr9P03750_001	Banana	cytosol	51.99	64.38
Solyc08g006550.2.1	Tomato	nucleus	52.34	56.98
PGSC0003DMT400067654	Potato	nucleus	52.17	56.58
AT5G02010.1	Thale cress	nucleus	50.78	53.66
VIT_13s0019g02710.t01	Wine grape	nucleus	54.77	53.02
CDY40325	Canola	nucleus	51.3	52.86
Bra009621.1-P	Field mustard	nucleus	51.13	52.68
CDY10476	Canola	nucleus	51.13	52.68
KRH73109	Soybean	nucleus	50.61	52.42
VIT_08s0007g01380.t01	Wine grape	nucleus	55.11	52.22
Solyc09g011480.2.1	Tomato	nucleus	51.3	50.34
KRH31060	Soybean	nucleus	52.17	50.33
KRG97804	Soybean	nucleus	51.47	50.08
Zm00001d002696_P001	Maize	cytosol	39.69	49.57
KRH00070	Soybean	nucleus	52.17	49.1
KRH75747	Soybean	nucleus	49.74	49.06
KRH15022	Soybean	nucleus	47.49	48.84
Zm00001d006269_P001	Maize	cytosol	31.89	47.92
Bra009152.1-P	Field mustard	cytosol, plastid	49.39	47.9
KRH65969	Soybean	nucleus	50.09	47.85
Zm00001d021489_P001	Maize	nucleus, plastid	37.95	47.2
AT5G05940.1	Thale cress	cytosol	49.74	46.97
Zm00001d029850_P001	Maize	nucleus, plastid	39.69	46.83
CDY41197	Canola	cytosol, plastid	44.71	46.57
CDY40246	Canola	cytosol, plastid	44.89	46.5
Solyc10g086660.1.1	Tomato	nucleus	53.55	45.51
Bra007183.1-P	Field mustard	cytosol, plastid	44.89	45.36
AT3G55660.1	Thale cress	cytosol, plastid	45.41	45.25
CDX70109	Canola	cytosol	49.39	45.02
PGSC0003DMT400049230	Potato	nucleus	53.9	44.94
PGSC0003DMT400005554	Potato	cytosol, plastid	51.13	44.76
Zm00001d021464_P002	Maize	nucleus, plastid	44.54	44.54
CDX98888	Canola	cytosol	49.22	44.51
VIT_08s0007g01390.t01	Wine grape	nucleus	44.02	42.69
Zm00001d012691_P001	Maize	cytosol, extracellular, mitochondrion, plastid	20.97	42.16
KRH49210	Soybean	nucleus, plastid	51.99	41.96
Zm00001d053307_P002	Maize	cytosol, plastid	32.93	39.34
Zm00001d038989_P002	Maize	nucleus, plastid	32.93	37.25
Zm00001d047899_P001	Maize	cytosol	17.85	37.05
Zm00001d043383_P001	Maize	nucleus	33.28	36.71
Zm00001d016001_P002	Maize	mitochondrion	33.45	36.14
Zm00001d023356_P001	Maize	cytosol	21.49	34.93
Zm00001d009549_P002	Maize	mitochondrion	33.1	34.6
Zm00001d037119_P001	Maize	plastid	24.61	32.95
Zm00001d049679_P001	Maize	plastid	24.61	32.13
Zm00001d017755_P002	Maize	cytosol	29.81	31.79
Zm00001d043889_P001	Maize	mitochondrion	32.93	31.41
Zm00001d051553_P004	Maize	cytosol	29.29	31.3
GSMUA_Achr6P14950_001	Banana	mitochondrion	51.3	22.29

Protein Annotations

Gene3D:1.20.58.1310	Gene3D:1.20.58.2010	EntrezGene:100193109	MapMan:27.4.3.1	UniProt:A0A1D6FP25	ProteinID:AQK93385.1
GO:GO:0003674	GO:GO:0005085	GO:GO:0005089	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0065009	InterPro:IPR005512	PFAM:PF03759	InterPro:PRONE_dom	PFscan:PS51334	PANTHER:PTHR33101
PANTHER:PTHR33101:SF27	InterPro:RopGEF	UniParc:UPI00084257DA	EnsemblPlantsGene:Zm00001d010062	EnsemblPlants:Zm00001d010062_P001	EnsemblPlants:Zm00001d010062_T001
SEG:seg	:	:	:	:	:

Description

Rop guanine nucleotide exchange factor 7

Coordinates

chr8:-:97855255..97858701

Molecular Weight (calculated)

62481.4 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.237

Length

577 amino acids

Sequence
(BLAST)

001: MARGDTASEA LTADSADEEG RRGSSSSASS DAASSFSCTY SPAPPDEWHK VAIIKTCVSV SADAAGGGGG KDQKPRGVVA AADRHGGASE MEMMKERFSK
101: LLLGEDMSGS GKGVCTALAI SNAVTNLCAT VFGQLWRLEP LPPEKKAMWR RELDCLLCVS DHIVELVPTW QTFPDGTRLE IMTSRPRSDL YINLPALRKL
201: DNMLLEILEG FRDVEFWYVD QGICAPDCDS SASYRRTFHR RDDKWWLPVP HVPHGGLREA TRRQLEHRRD CASQILKAAM AINSNALAEM AVPVSYLDSL
301: PKVHQSLSTG CRTPVPRVPV PNGRAALGDV IYRYITSDQF SQDYLLDCLD LSSEYQALEI ANRVEASIYV WRRKGGGGAR SSWGIVKDMV MDTEKRDLLA
401: ERAEALLMSL KQRFPGLTQT SLDMSKIQYN KDVGKSILES YSRVLESLAS NIIARIDDLL NVDELSKQPA DSIPSAGADA KVACKSNGSK QATAVPASGT
501: PYATAYATPS FSPAQLSSPS KIGRALLVDR RSHHVAGAKR ATASAADRAG VEVVKGMVVD GSSAIFDIIP IAVPAKI

Best Arabidopsis Sequence Match ( AT5G02010.1 )
(BLAST)

001: MDGSSENLPE VEEKGRESSC CSSETTRQEE EEQSPSCTED FTASPVSSRW SVKNIDGEKK KIRSDSRVSE VEMMKERFSK LLLGEDMSGS GNGVCTALAI
101: SNAITNLCAT LFGQLWRLEP LPTEKKEMWR REMEWLLCVS DHIVEMTPTW QTFPDGTKLE IMTCRPRSDL YVNLPALRKL DNMLLEILDS FEETEFWYVD
201: QGIMAHESAA DGSSSFRKSF QRQEDKWWLP VPRVSPGGLQ ENSRKQLQHK RDCTNQILKA AMAINSITLA DMEIPESYLE SLPRKGRSCL GDLIYRYISS
301: DQFSPECLLD CLDLSSEHQA IEIANRVESS IYLWHKRTNS KPATNTKTSW EMVKELMVDA DKLELMADRA ESLLLSLKQR FPGLPQTALD MSKIQYNKDI
401: GKSILESYSR VLESLAFNIV ARIDDLLFVD DLTRHSSDQI PTTLGNNGND APKSIAVPVS NYTTPSYSPS KQELRSSITV PPSPSRFKIP HSSSVKRVLT
501: AYVTKNEPRL KNLPLERSSR SSSSERLSLE KCMKESLNVS NLDPGI

Arabidopsis Description

ROPGEF7Rop guanine nucleotide exchange factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.