Factsheet for Bra035878.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P
Bra011743.1-P
Bra012351.1-P
Bra015010.1-P
Bra017810.1-P
Bra024548.1-P
Bra038448.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62880.1	Bra012351.1-P	AT1G22920.1	21798944
AT5G62880.1	Bra024548.1-P	AT1G22920.1	21798944
AT5G62880.1	Bra005107.1-P	AT2G38440.1	17267444
AT5G62880.1	Bra038448.1-P	AT4G16340.1	17267444
AT5G62880.1	Bra011743.1-P	AT4G36910.1	21798944
AT5G62880.1	Bra017810.1-P	AT4G36910.1	21798944
AT5G62880.1	Bra015010.1-P	AT4G38430.1	22500990

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010128.1-P	Field mustard	cytosol	96.59	95.19
CDY56740	Canola	cytosol	99.02	93.98
CDY68200	Canola	cytosol	82.93	93.92
AT5G62880.1	Thale cress	cytosol	97.56	93.02
Bra029240.1-P	Field mustard	cytosol	97.07	92.56
KRH54429	Soybean	cytosol	27.32	86.15
Solyc03g114070.2.1	Tomato	cytosol	86.83	84.76
PGSC0003DMT400063229	Potato	cytosol	86.34	84.29
VIT_17s0000g07890.t01	Wine grape	cytosol	85.85	83.81
KRH57035	Soybean	cytosol	84.39	82.78
Os06t0234200-03	Rice	cytosol	86.34	82.33
TraesCS6D01G288300.1	Wheat	cytosol	84.88	81.69
TraesCS6A01G309000.2	Wheat	cytosol	84.39	81.22
HORVU6Hr1G076210.5	Barley	cytosol	84.88	80.93
EES05544	Sorghum	cytosol	84.39	80.84
Os02t0742200-01	Rice	cytosol	84.39	80.84
KRH63489	Soybean	cytosol	83.41	80.66
EER88130	Sorghum	cytosol	84.39	80.47
TraesCS7B01G096200.1	Wheat	cytosol	83.41	80.28
TraesCS7A01G191400.1	Wheat	cytosol	82.93	79.81
TraesCS7D01G192400.1	Wheat	cytosol	82.93	79.81
Bra016477.1-P	Field mustard	cytosol	75.61	79.08
Bra015807.1-P	Field mustard	cytosol	75.61	79.08
Bra003739.1-P	Field mustard	cytosol	75.12	78.97
Bra040869.1-P	Field mustard	cytosol	67.32	78.86
Bra011651.1-P	Field mustard	cytosol	75.61	78.68
Bra002093.1-P	Field mustard	cytosol	75.61	78.68
Bra008227.1-P	Field mustard	cytosol	75.12	78.57
TraesCS6B01G338000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.46	78.4
PGSC0003DMT400063227	Potato	cytosol	60.98	78.12
Bra017740.1-P	Field mustard	cytosol	74.63	77.67
Bra012858.1-P	Field mustard	cytosol, plastid	74.63	77.67
Bra012210.1-P	Field mustard	cytosol	74.63	77.67
KRH54430	Soybean	cytosol	55.12	77.4
Bra037248.1-P	Field mustard	cytosol	74.15	77.16
Bra036819.1-P	Field mustard	cytosol, plastid	74.15	77.16
Bra011578.1-P	Field mustard	cytosol	74.15	76.77
Bra038892.1-P	Field mustard	cytosol, plastid	73.66	76.65
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	73.66	75.88
Bra022004.1-P	Field mustard	cytosol	72.2	73.63
Bra025045.1-P	Field mustard	cytosol	71.71	73.13
Bra011072.1-P	Field mustard	cytosol	74.15	72.73
HORVU7Hr1G038980.5	Barley	cytosol	83.9	68.8
Bra004857.1-P	Field mustard	plastid	69.76	67.77
KRH03338	Soybean	cytosol, plastid	83.9	67.72
Bra013050.1-P	Field mustard	cytosol	50.73	66.67
Zm00001d052273_P004	Maize	plastid	69.76	65.9
GSMUA_Achr6P36120_001	Banana	cytosol	84.88	62.59
Bra013051.1-P	Field mustard	cytosol	58.54	61.86
Zm00001d044802_P001	Maize	cytosol	83.9	59.93
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	84.39	34.19

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra035878	EnsemblPlants:Bra035878.1	EnsemblPlants:Bra035878.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4F478	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF255	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI00025420FF	SEG:seg	:	:	:

Description

AT5G62880 (E=2e-105) ARAC10, ATRAC10, ATROP11 | ARAC10; GTP binding

Coordinates

chrA09:+:3154741..3156249

Molecular Weight (calculated)

22725.3 Da

IEP (calculated)

9.322

GRAVY (calculated)

-0.253

Length

205 amino acids

Sequence
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYVPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPVVKQKDKT KKKKKQQSNH
201: HGCLS

Best Arabidopsis Sequence Match ( AT5G62880.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLSFSLV SRASYENVFK
101: KWIPELQHFA PGVPLVLVGT KLDLREDKHY LADHPGLSPV TTAQGEELRK LIGATYYIEC SSKTQQNVKA VFDSAIKEVI KPLVKQKEKT KKKKKQKSNH
201: GCLSNVLCGR IVTRH

Arabidopsis Description

ARAC10ROP11 [Source:UniProtKB/TrEMBL;Acc:A0A178UC00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.