Factsheet for Bra025045.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45970.1	Bra005107.1-P	AT2G38440.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58056	Canola	cytosol	100.0	100.0
CDX77623	Canola	cytosol	99.5	99.5
AT5G45970.1	Thale cress	cytosol	98.01	98.01
Bra022004.1-P	Field mustard	cytosol	96.02	96.02
KRH50139	Soybean	cytosol, nucleus, plastid	85.57	87.76
Solyc02g077400.2.1	Tomato	cytosol, plastid	85.57	87.31
PGSC0003DMT400027852	Potato	cytosol	85.57	87.31
GSMUA_Achr10P...	Banana	cytosol	84.08	86.22
Os02t0312600-01	Rice	cytosol	83.58	85.28
Bra040869.1-P	Field mustard	cytosol	72.14	82.86
Bra008227.1-P	Field mustard	cytosol	80.6	82.65
Bra016477.1-P	Field mustard	cytosol	80.6	82.65
GSMUA_Achr6P13740_001	Banana	cytosol	80.1	82.14
Bra003739.1-P	Field mustard	cytosol	79.6	82.05
Bra012210.1-P	Field mustard	cytosol	80.1	81.73
Bra015807.1-P	Field mustard	cytosol	79.6	81.63
Bra002093.1-P	Field mustard	cytosol	79.6	81.22
Bra017740.1-P	Field mustard	cytosol	79.1	80.71
Bra011651.1-P	Field mustard	cytosol	79.1	80.71
Bra012858.1-P	Field mustard	cytosol, plastid	78.61	80.2
Bra036819.1-P	Field mustard	cytosol, plastid	78.61	80.2
Bra037248.1-P	Field mustard	cytosol	78.61	80.2
KRH20356	Soybean	cytosol	84.58	79.81
Bra038892.1-P	Field mustard	cytosol, plastid	77.61	79.19
Bra011578.1-P	Field mustard	cytosol	77.61	78.79
VIT_10s0003g00570.t01	Wine grape	cytosol	66.17	77.78
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	76.62	77.39
Bra035878.1-P	Field mustard	cytosol	73.13	71.71
Bra011072.1-P	Field mustard	cytosol	74.13	71.29
Bra004857.1-P	Field mustard	plastid	74.63	71.09
Bra010128.1-P	Field mustard	cytosol	71.14	68.75
Bra013050.1-P	Field mustard	cytosol	52.74	67.95
Bra029240.1-P	Field mustard	cytosol	72.14	67.44
Bra013051.1-P	Field mustard	cytosol	62.19	64.43

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra025045	EnsemblPlants:Bra025045.1	EnsemblPlants:Bra025045.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4E8D9	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF178	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI000253FBEA	SEG:seg	:	:	:

Description

AT5G45970 (E=4e-101) ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARABIDOPSIS RAC-LIKE 2); GTP binding

Coordinates

chrA06:-:24860156..24861989

Molecular Weight (calculated)

22468.3 Da

IEP (calculated)

10.093

GRAVY (calculated)

-0.177

Length

201 amino acids

Sequence
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENIYKKW
101: LPELKHYAPT IPIVLVGTKL DLRDDKQFLK DHPGAASITT AQGEELRKMI GAVRYLECSS KTQQNVKSVF DTAIRVALRP PKAKKKIKPL KTKRSRTCFF
201: L

Best Arabidopsis Sequence Match ( AT5G45970.1 )
(BLAST)

001: MSTARFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENIHKKW
101: LPELKHYAPG IPIVLVGTKL DLRDDKQFLK DHPGAASITT AQGEELRKMI GAVRYLECSS KTQQNVKAVF DTAIRVALRP PKAKKKIKPL KTKRSRICFF
201: L

Arabidopsis Description

ARAC2ROP7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.