Factsheet for Bra013050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02239	Canola	cytosol	100.0	100.0
GSMUA_Achr1P14810_001	Banana	cytosol	44.87	66.67
AT4G35020.2	Thale cress	cytosol	83.33	65.66
Bra011578.1-P	Field mustard	cytosol	82.69	65.15
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	82.69	64.82
Zm00001d018573_P002	Maize	mitochondrion	77.56	61.42
Os02t0834000-01	Rice	cytosol	76.92	60.91
HORVU6Hr1G095230.1	Barley	cytosol	76.92	60.91
GSMUA_Achr3P00680_001	Banana	cytosol, nucleus, plastid	75.0	60.62
TraesCS1D01G325200.1	Wheat	cytosol	76.28	60.41
TraesCS1B01G337200.1	Wheat	cytosol	76.28	60.41
Bra003739.1-P	Field mustard	cytosol	75.0	60.0
TraesCS1A01G323900.1	Wheat	cytosol	75.64	59.9
Bra008227.1-P	Field mustard	cytosol	73.72	58.67
Bra016477.1-P	Field mustard	cytosol	73.72	58.67
Bra002093.1-P	Field mustard	cytosol	73.72	58.38
Bra011651.1-P	Field mustard	cytosol	73.08	57.87
Bra013051.1-P	Field mustard	cytosol	71.79	57.73
Bra040869.1-P	Field mustard	cytosol	64.74	57.71
Bra037248.1-P	Field mustard	cytosol	72.44	57.36
Bra038892.1-P	Field mustard	cytosol, plastid	72.44	57.36
Bra017740.1-P	Field mustard	cytosol	72.44	57.36
Bra012210.1-P	Field mustard	cytosol	72.44	57.36
Bra015807.1-P	Field mustard	cytosol	71.79	57.14
Bra036819.1-P	Field mustard	cytosol, plastid	71.79	56.85
Bra012858.1-P	Field mustard	cytosol, plastid	71.79	56.85
GSMUA_Achr3P26670_001	Banana	cytosol	69.87	55.33
Bra025045.1-P	Field mustard	cytosol	67.95	52.74
Bra022004.1-P	Field mustard	cytosol	67.31	52.24
KXG31438	Sorghum	cytosol	69.23	51.18
Bra035878.1-P	Field mustard	cytosol	66.67	50.73
Bra004857.1-P	Field mustard	plastid	68.59	50.71
Bra011072.1-P	Field mustard	cytosol	65.38	48.8
Bra010128.1-P	Field mustard	cytosol	64.1	48.08
GSMUA_Achr1P14800_001	Banana	cytosol	30.77	47.06
Bra029240.1-P	Field mustard	cytosol	64.74	46.98

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra013050	EnsemblPlants:Bra013050.1	EnsemblPlants:Bra013050.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4D990	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PANTHER:PTHR24072	PANTHER:PTHR24072:SF249
SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0002540AFD
SEG:seg	:	:	:	:	:

Description

AT4G35020 (E=4e-037) ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase

Coordinates

chrA03:+:20768955..20770131

Molecular Weight (calculated)

16988.7 Da

IEP (calculated)

8.625

GRAVY (calculated)

0.000

Length

156 amino acids

Sequence
(BLAST)

001: MSDPRFIKCV TVGDGATGKT CLLISYTSNT FPTDYVPTVF DIISANVIVD GNSINLGWVP ELRHHAPGVP IFLVGTKLDL RDDKEYLLEH PGAVPISTSH
101: GVELMKLVGA FAYTECSAKT QQNVKAVFDV AIKVVLELPK NKNKKNKKSQ KGCSIL

Best Arabidopsis Sequence Match ( AT1G20090.1 )
(BLAST)

001: MASRFIKCVT VGDGAVGKTC MLISYTSNTF PTDYVPTVFD NFSANVVVDG NTVNLGLWDT AGQEDYNRLR PLSYRGADVF ILAFSLISKA SYENIAKKWI
101: PELRHYAPGV PIILVGTKLD LRDDKQFFID HPGAVPITTN QGEELKKLIG SAVYIECSSK TQQNVKAVFD AAIKVVLQPP KQKKKKKNKN RCAFL

Arabidopsis Description

ARAC4RAC-like GTP-binding protein ARAC4 [Source:UniProtKB/TrEMBL;Acc:Q0WU07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.