Factsheet for Bra036819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra011367.1-P
Bra037049.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51300.1	Bra011367.1-P	AT4G32650.1	15299147
AT3G51300.1	Bra037049.1-P	AT4G32650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59617	Canola	cytosol, plastid	100.0	100.0
CDX77994	Canola	cytosol, plastid	100.0	100.0
CDX73732	Canola	cytosol, plastid	100.0	100.0
Bra012858.1-P	Field mustard	cytosol, plastid	98.98	98.98
Bra038892.1-P	Field mustard	cytosol, plastid	97.46	97.46
Bra040869.1-P	Field mustard	cytosol	85.79	96.57
AT3G51300.1	Thale cress	cytosol, plastid	96.45	96.45
Bra017740.1-P	Field mustard	cytosol	96.45	96.45
KRH08028	Soybean	cytosol	95.43	95.43
KRH28825	Soybean	cytosol	94.92	94.92
KRH76629	Soybean	cytosol	94.92	94.92
Bra011651.1-P	Field mustard	cytosol	94.42	94.42
KRH69754	Soybean	cytosol	94.42	94.42
Bra002093.1-P	Field mustard	cytosol	93.91	93.91
PGSC0003DMT400058108	Potato	cytosol	93.4	93.4
Solyc02g062020.2.1	Tomato	plastid	92.89	92.89
PGSC0003DMT400009227	Potato	cytosol	92.89	92.89
PGSC0003DMT400061371	Potato	cytosol	92.89	92.89
Bra037248.1-P	Field mustard	cytosol	92.89	92.89
Solyc02g083580.2.1	Tomato	nucleus	92.39	92.39
VIT_04s0023g03860.t01	Wine grape	cytosol	89.34	89.8
Bra016477.1-P	Field mustard	cytosol	86.8	87.24
Bra008227.1-P	Field mustard	cytosol	86.8	87.24
Bra003739.1-P	Field mustard	cytosol	86.29	87.18
Bra015807.1-P	Field mustard	cytosol	86.29	86.73
Bra011578.1-P	Field mustard	cytosol	86.8	86.36
Bra012210.1-P	Field mustard	cytosol	85.79	85.79
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	84.26	83.42
Solyc03g033420.2.1	Tomato	cytosol	81.73	81.73
Bra025045.1-P	Field mustard	cytosol	80.2	78.61
Bra022004.1-P	Field mustard	cytosol	79.19	77.61
Bra035878.1-P	Field mustard	cytosol	77.16	74.15
Bra013050.1-P	Field mustard	cytosol	56.85	71.79
Bra010128.1-P	Field mustard	cytosol	74.62	70.67
Bra004857.1-P	Field mustard	plastid	75.13	70.14
Bra029240.1-P	Field mustard	cytosol	75.63	69.3
Bra011072.1-P	Field mustard	cytosol	73.1	68.9
Bra013051.1-P	Field mustard	cytosol	67.01	68.04

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra036819	EnsemblPlants:Bra036819.1	EnsemblPlants:Bra036819.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4F6V9	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF179	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI00019A9E72	SEG:seg	:	:	:

Description

AT3G51300 (E=1e-097) ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding

Coordinates

chrA09:+:25611531..25612584

Molecular Weight (calculated)

21619.0 Da

IEP (calculated)

9.344

GRAVY (calculated)

-0.094

Length

197 amino acids

Sequence
(BLAST)

001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIILVGSKL DLRDDKQFFI DHPGAVPITT AQGEELRKLI DAPTYVECSS KSQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Best Arabidopsis Sequence Match ( AT3G51300.1 )
(BLAST)

001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKQI GAPTYIECSS KTQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Arabidopsis Description

ARAC11Rac-like GTP-binding protein ARAC11 [Source:UniProtKB/Swiss-Prot;Acc:P92978]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.