Factsheet for Bra037248.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P
Bra038448.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35950.1	Bra005107.1-P	AT2G38440.1	17267444
AT4G35950.1	Bra038448.1-P	AT4G16340.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30344	Canola	cytosol	99.49	99.49
Bra040869.1-P	Field mustard	cytosol	86.29	97.14
Bra011651.1-P	Field mustard	cytosol	96.95	96.95
AT4G35950.1	Thale cress	cytosol	96.45	96.45
Bra002093.1-P	Field mustard	cytosol	96.45	96.45
Bra017740.1-P	Field mustard	cytosol	95.94	95.94
Solyc02g062020.2.1	Tomato	plastid	93.91	93.91
PGSC0003DMT400061371	Potato	cytosol	93.91	93.91
Bra012858.1-P	Field mustard	cytosol, plastid	93.91	93.91
Solyc02g083580.2.1	Tomato	nucleus	93.4	93.4
PGSC0003DMT400058108	Potato	cytosol	93.4	93.4
Bra038892.1-P	Field mustard	cytosol, plastid	93.4	93.4
PGSC0003DMT400009227	Potato	cytosol	92.89	92.89
Bra036819.1-P	Field mustard	cytosol, plastid	92.89	92.89
VIT_04s0023g03860.t01	Wine grape	cytosol	89.34	89.8
Bra011578.1-P	Field mustard	cytosol	88.32	87.88
Bra008227.1-P	Field mustard	cytosol	86.8	87.24
Bra003739.1-P	Field mustard	cytosol	86.29	87.18
Bra016477.1-P	Field mustard	cytosol	86.29	86.73
Bra015807.1-P	Field mustard	cytosol	85.79	86.22
Bra012210.1-P	Field mustard	cytosol	85.28	85.28
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	85.79	84.92
Solyc03g033420.2.1	Tomato	cytosol	81.73	81.73
Bra025045.1-P	Field mustard	cytosol	80.2	78.61
Bra022004.1-P	Field mustard	cytosol	78.68	77.11
Bra035878.1-P	Field mustard	cytosol	77.16	74.15
Bra013050.1-P	Field mustard	cytosol	57.36	72.44
Bra011072.1-P	Field mustard	cytosol	76.14	71.77
Bra004857.1-P	Field mustard	plastid	76.14	71.09
Bra010128.1-P	Field mustard	cytosol	74.62	70.67
Bra013051.1-P	Field mustard	cytosol	68.53	69.59
Bra029240.1-P	Field mustard	cytosol	75.63	69.3

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra037248	EnsemblPlants:Bra037248.1	EnsemblPlants:Bra037248.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	UniProt:M4F837	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF179	SMART:SM00173
SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI0002541E65	SEG:seg	:	:	:

Description

AT2G17800 (E=6e-102) ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1; GTP binding

Coordinates

chrA09:+:4763779..4764918

Molecular Weight (calculated)

21472.8 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.083

Length

197 amino acids

Sequence
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELEHYAPG VPIVLVGTKL DLRDDKQFFV DHPGAVPITN AQGEELKKLI GAPAYIECSS KSQENVKGVF DAAIRVVLQP PNKKKKKGKA QKACSIL

Best Arabidopsis Sequence Match ( AT2G17800.2 )
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL

Arabidopsis Description

ARAC1ROP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.