Factsheet for TraesCS1D01G325200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G337200.1	Wheat	cytosol	99.49	99.49
HORVU6Hr1G095230.1	Barley	cytosol	99.49	99.49
TraesCS1A01G323900.1	Wheat	cytosol	98.48	98.48
Os02t0834000-01	Rice	cytosol	94.92	94.92
GSMUA_Achr1P14800_001	Banana	cytosol	48.73	94.12
Zm00001d018573_P002	Maize	mitochondrion	93.91	93.91
Bra011578.1-P	Field mustard	cytosol	93.4	92.93
CDX75480	Canola	cytosol	93.4	92.93
GSMUA_Achr3P00680_001	Banana	cytosol, nucleus, plastid	90.36	92.23
AT4G35020.2	Thale cress	cytosol	92.39	91.92
CDX71303	Canola	cytosol	82.23	90.5
GSMUA_Achr3P26670_001	Banana	cytosol	90.36	90.36
Bra001994.1-P	Field mustard	cytosol, nucleus, plastid	90.86	89.95
CDY31409	Canola	cytosol	81.73	89.94
TraesCS6D01G068500.2	Wheat	cytosol	89.34	89.34
CDX69104	Canola	cytosol	92.39	86.26
GSMUA_Achr1P14810_001	Banana	cytosol	44.67	83.81
CDY02239	Canola	cytosol	60.41	76.28
Bra013050.1-P	Field mustard	cytosol	60.41	76.28
CDX89745	Canola	cytosol	73.1	75.0
CDY02240	Canola	cytosol	72.08	74.74
TraesCS7D01G192400.1	Wheat	cytosol	80.2	74.18
TraesCS6D01G288300.1	Wheat	cytosol	79.7	73.71
Bra013051.1-P	Field mustard	cytosol	72.08	73.2
TraesCS1D01G336200.1	Wheat	cytosol	78.17	72.64
KXG31438	Sorghum	cytosol	74.11	69.19
CDX89746	Canola	cytosol	75.63	67.12
TraesCS3D01G161900.1	Wheat	cytosol	73.1	66.06

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005819	GO:GO:0005856	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009719	GO:GO:0009958	GO:GO:0009987	GO:GO:0010928	GO:GO:0016020	GO:GO:0016787
GO:GO:0019003	GO:GO:0030427	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF249	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS1D01G325200
EnsemblPlants:TraesCS1D01G325200.1	TIGR:cd04133	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:417574113..417576844

Molecular Weight (calculated)

21664.1 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.113

Length

197 amino acids

Sequence
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENVTKKW
101: IPELRHYAPG VPIILVGTKL DLRDDQQFFV DHPGAVPIST AQGEELKKVI GATAYIECSS KTQQNIKAVF DAAIKVVLQP PKQKRKKRKS QKGCSIL

Best Arabidopsis Sequence Match ( AT4G35020.3 )
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL

Arabidopsis Description

ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.