Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011578.1-P | Field mustard | cytosol | 91.94 | 97.98 |
| CDX75480 | Canola | cytosol | 91.94 | 97.98 |
| AT4G35020.2 | Thale cress | cytosol | 91.0 | 96.97 |
| CDX71303 | Canola | cytosol | 79.15 | 93.3 |
| CDY31409 | Canola | cytosol | 79.15 | 93.3 |
| HORVU6Hr1G095230.1 | Barley | cytosol | 86.73 | 92.89 |
| TraesCS1D01G325200.1 | Wheat | cytosol | 86.26 | 92.39 |
| TraesCS1B01G337200.1 | Wheat | cytosol | 86.26 | 92.39 |
| TraesCS1A01G323900.1 | Wheat | cytosol | 85.31 | 91.37 |
| GSMUA_Achr1P14800_001 | Banana | cytosol | 43.6 | 90.2 |
| Zm00001d018573_P002 | Maize | mitochondrion | 83.89 | 89.85 |
| Os02t0834000-01 | Rice | cytosol | 83.89 | 89.85 |
| GSMUA_Achr3P00680_001 | Banana | cytosol, nucleus, plastid | 81.04 | 88.6 |
| CDY30344 | Canola | cytosol | 81.99 | 87.82 |
| CDY26832 | Canola | cytosol | 81.99 | 87.82 |
| CDY07816 | Canola | cytosol | 78.2 | 87.77 |
| CDX68116 | Canola | cytosol | 81.04 | 87.69 |
| CDX85925 | Canola | cytosol | 81.04 | 87.69 |
| CDY33284 | Canola | cytosol, plastid | 81.52 | 87.31 |
| CDY29012 | Canola | cytosol, plastid | 81.04 | 86.8 |
| CDX90652 | Canola | cytosol, plastid | 80.57 | 86.29 |
| CDY13528 | Canola | cytosol | 80.09 | 86.22 |
| CDY39066 | Canola | cytosol | 80.09 | 86.22 |
| CDY20828 | Canola | cytosol | 80.09 | 85.79 |
| CDX73732 | Canola | cytosol, plastid | 80.09 | 85.79 |
| CDX77994 | Canola | cytosol, plastid | 80.09 | 85.79 |
| CDY59617 | Canola | cytosol, plastid | 80.09 | 85.79 |
| CDY43414 | Canola | cytosol | 80.09 | 85.79 |
| CDY54338 | Canola | cytosol | 80.09 | 85.79 |
| CDY62937 | Canola | cytosol | 79.62 | 85.71 |
| CDY71157 | Canola | cytosol | 68.25 | 85.21 |
| CDX73206 | Canola | cytosol | 79.15 | 85.2 |
| CDY59407 | Canola | cytosol, plastid | 70.62 | 85.14 |
| CDY24378 | Canola | cytosol | 78.67 | 85.13 |
| CDX87656 | Canola | cytosol | 78.2 | 84.18 |
| GSMUA_Achr3P26670_001 | Banana | cytosol | 78.2 | 83.76 |
| CDY29201 | Canola | cytosol | 78.2 | 82.91 |
| GSMUA_Achr1P14810_001 | Banana | cytosol | 40.76 | 81.9 |
| CDY57592 | Canola | cytosol | 79.15 | 81.86 |
| CDY69676 | Canola | cytosol | 34.12 | 81.82 |
| CDY02239 | Canola | cytosol | 60.19 | 81.41 |
| CDX89745 | Canola | cytosol | 70.62 | 77.6 |
| CDY02240 | Canola | cytosol | 69.19 | 76.84 |
| CDY57346 | Canola | cytosol | 72.99 | 76.62 |
| CDY58056 | Canola | cytosol | 72.99 | 76.62 |
| CDX77623 | Canola | cytosol | 72.51 | 76.12 |
| CDY67441 | Canola | cytosol | 71.56 | 75.5 |
| CDX89746 | Canola | cytosol | 76.3 | 72.52 |
| CDY71169 | Canola | plastid | 72.51 | 72.51 |
| CDY48250 | Canola | plastid | 72.51 | 71.83 |
| CDY06854 | Canola | cytosol | 69.67 | 70.33 |
| CDY35236 | Canola | cytosol | 69.19 | 69.86 |
| CDY56740 | Canola | cytosol | 70.14 | 68.52 |
| CDY45748 | Canola | cytosol | 68.25 | 67.61 |
| CDY00332 | Canola | cytosol | 68.72 | 67.44 |
| CDY30738 | Canola | cytosol | 68.72 | 67.44 |
| CDY68200 | Canola | cytosol | 56.87 | 66.3 |
| KXG31438 | Sorghum | cytosol | 64.45 | 64.45 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:A0A078BYT5 | EnsemblPlants:CDX69104 | ProteinID:CDX69104 | ProteinID:CDX69104.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00130887001 | InterPro:IPR003578 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF249 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | InterPro:Small_GTPase_Rho |
| TIGRFAMs:TIGR00231 | UniParc:UPI0004EF479D | SEG:seg | : | : | : |
Description
BnaC01g03490D
Coordinates
chrLK031789:+:2946059..2947826
Molecular Weight (calculated)
23301.1 Da
IEP (calculated)
9.986
GRAVY (calculated)
-0.103
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGKATFFIF HYSSSAERDY NRLRPLSYRG ADVFLLAFSL
101: VSKASYENVS KKWVPELRHY APGVPIILVG TKLDLRDDKQ FFVEHPGAVP ISTAQGEELK KVIGAPAYIE CSAKTQQNVK AVFDAAIKVV LQPPKNKKRK
201: KRKSQKACSI L
101: VSKASYENVS KKWVPELRHY APGVPIILVG TKLDLRDDKQ FFVEHPGAVP ISTAQGEELK KVIGAPAYIE CSAKTQQNVK AVFDAAIKVV LQPPKNKKRK
201: KRKSQKACSI L
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL
Arabidopsis Description
ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.