CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92402
EER99291
KXG25872
KXG27287
KXG39465

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48040.1	KXG27287	AT1G22920.1	21798944
AT5G62880.1	KXG27287	AT1G22920.1	21798944
AT5G62880.1	EER92402	AT2G38440.1	17267444
AT5G62880.1	KXG39465	AT4G16340.1	17267444
AT5G62880.1	KXG25872	AT4G36910.1	21798944
AT5G62880.1	EER99291	AT4G38430.1	22500990
AT5G62880.1	EER92402	AT5G01730.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0234200-03	Rice	cytosol	93.49	93.49
TraesCS7A01G191400.1	Wheat	cytosol	89.3	90.14
TraesCS7B01G096200.1	Wheat	cytosol	89.3	90.14
TraesCS7D01G192400.1	Wheat	cytosol	88.84	89.67
EES05544	Sorghum	cytosol	87.44	87.85
KRH54429	Soybean	cytosol	26.51	87.69
Solyc03g114070.2.1	Tomato	cytosol	85.12	87.14
PGSC0003DMT400063229	Potato	cytosol	84.65	86.67
VIT_17s0000g07890.t01	Wine grape	cytosol	82.79	84.76
KRH57035	Soybean	cytosol	82.33	84.69
Bra035878.1-P	Field mustard	cytosol	80.47	84.39
AT3G48040.1	Thale cress	cytosol	80.93	83.65
GSMUA_Achr3P06090_001	Banana	cytosol, mitochondrion, plastid	83.26	83.64
Bra010128.1-P	Field mustard	cytosol	80.47	83.17
EES06186	Sorghum	cytosol	75.35	82.23
AT5G62880.1	Thale cress	cytosol	81.86	81.86
CDY30738	Canola	cytosol	81.4	81.4
Bra029240.1-P	Field mustard	cytosol	81.4	81.4
KRH63489	Soybean	cytosol	80.0	81.13
CDY00332	Canola	cytosol	80.93	80.93
CDY56740	Canola	cytosol	80.93	80.56
CDY45748	Canola	cytosol	79.53	80.28
GSMUA_Achr2P00650_001	Banana	cytosol	79.07	79.81
PGSC0003DMT400063227	Potato	cytosol	58.14	78.12
KRH54430	Soybean	cytosol	52.56	77.4
CDY68200	Canola	cytosol	65.12	77.35
HORVU7Hr1G038980.5	Barley	cytosol	88.37	76.0
EES18497	Sorghum	cytosol	73.95	75.0
EES19253	Sorghum	cytosol	70.7	70.37
KRH03338	Soybean	cytosol, plastid	81.4	68.9
Zm00001d044802_P001	Maize	cytosol	91.16	68.29
KXG31438	Sorghum	cytosol	60.0	61.14

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:8065540	UniProt:C5Z7F5	EnsemblPlants:EER88130	ProteinID:EER88130
ProteinID:EER88130.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF174
SMART:SM00173	SMART:SM00174	SMART:SM00175	EnsemblPlantsGene:SORBI_3010G096100	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0001A893E0	RefSeq:XP_002436763.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:8651752..8656603

Molecular Weight (calculated)

24015.2 Da

IEP (calculated)

9.823

GRAVY (calculated)

-0.213

Length

215 amino acids

Sequence
(BLAST)

001: MASSASRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VDGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENVMK
101: KWLPELQHYA PGVPIVLAGT KLDLREDKHY LLDHPGAVPV TTAQGEELRK HIGATCYIEC SSKTQQNVKA VFDAAIKVVI RPPTKQRERK KKKARRGCSM
201: FCSRIMHTRR LGCFK

Best Arabidopsis Sequence Match ( AT3G48040.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN

Arabidopsis Description

ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.