CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010732_P002	Maize	plasma membrane	97.17	97.17
Zm00001d038688_P002	Maize	cytosol	97.17	94.93
TraesCS1D01G336200.1	Wheat	cytosol	94.81	94.81
TraesCS1B01G347000.1	Wheat	cytosol	94.81	94.81
TraesCS1A01G333600.1	Wheat	cytosol	94.81	94.81
HORVU1Hr1G076880.4	Barley	cytosol	93.4	90.83
Os05t0513800-01	Rice	plasma membrane	91.04	90.19
GSMUA_Achr6P26750_001	Banana	cytosol	87.74	88.57
GSMUA_Achr9P06320_001	Banana	cytosol	86.32	87.14
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	85.85	86.67
GSMUA_Achr8P27380_001	Banana	cytosol	84.91	86.12
AT4G28950.1	Thale cress	cytosol	84.43	85.65
Bra011072.1-P	Field mustard	cytosol	83.96	85.17
CDY35236	Canola	cytosol	83.96	85.17
CDY06854	Canola	cytosol	83.49	84.69
Solyc12g007210.1.1	Tomato	cytosol	83.49	83.89
PGSC0003DMT400000816	Potato	cytosol	83.02	83.41
PGSC0003DMT400022302	Potato	cytosol	82.55	83.33
Solyc07g020800.2.1	Tomato	cytosol	82.55	83.33
EES19253	Sorghum	cytosol	82.55	81.02
EES06186	Sorghum	cytosol	72.64	78.17
EES05544	Sorghum	cytosol	75.0	74.3
EER88130	Sorghum	cytosol	75.0	73.95
KRG90165	Soybean	cytosol	37.26	65.83
KXG31438	Sorghum	cytosol	56.6	56.87

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:8067502	UniProt:C5Z0W8	EnsemblPlants:EES18497	ProteinID:EES18497
ProteinID:EES18497.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	EnsemblPlantsGene:SORBI_3009G195600	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0001A88B6D	RefSeq:XP_002440067.1

Description

hypothetical protein

Coordinates

chr9:+:54652600..54655364

Molecular Weight (calculated)

23338.2 Da

IEP (calculated)

9.623

GRAVY (calculated)

-0.130

Length

212 amino acids

Sequence
(BLAST)

001: MSVTKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVSVD GNIVNLGLWD TAGQEDYSRL RPLSYRGADV FVLAFSLISR ASYENVLKKW
101: MPELRRFAPN VPVVLVGTKL DLRDHRAYLA DHPGASTITT AQGEELRKQI GAAAYIECSS KTQQNVKSVF DTAIKVVLQP PRRREAMPAR KKNRRGSGCS
201: IMNLMCGSTC AA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.