Factsheet for Solyc12g007210.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000816	Potato	cytosol	96.21	96.21
Solyc07g020800.2.1	Tomato	cytosol	89.1	89.52
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	88.63	89.05
Bra011072.1-P	Field mustard	cytosol	85.31	86.12
CDY35236	Canola	cytosol	85.31	86.12
CDY06854	Canola	cytosol	85.31	86.12
KRH39320	Soybean	cytosol	86.26	85.85
KRH48356	Soybean	cytosol	85.31	85.71
AT4G28950.1	Thale cress	cytosol	84.83	85.65
TraesCS1D01G336200.1	Wheat	cytosol	85.31	84.91
TraesCS1B01G347000.1	Wheat	cytosol	85.31	84.91
TraesCS1A01G333600.1	Wheat	cytosol	85.31	84.91
GSMUA_Achr6P26750_001	Banana	cytosol	83.89	84.29
GSMUA_Achr9P06320_001	Banana	cytosol	83.41	83.81
EES18497	Sorghum	cytosol	83.89	83.49
Zm00001d010732_P002	Maize	plasma membrane	83.41	83.02
HORVU1Hr1G076880.4	Barley	cytosol	84.83	82.11
Os05t0513800-01	Rice	plasma membrane	82.94	81.78
GSMUA_Achr8P27380_001	Banana	cytosol	80.57	81.34
Zm00001d038688_P002	Maize	cytosol	83.41	81.11
EES19253	Sorghum	cytosol	79.62	77.78
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	78.67	77.57
Solyc02g083580.2.1	Tomato	nucleus	70.14	75.13
Solyc01g111560.2.1	Tomato	cytosol, nucleus, plastid	69.19	73.74
Solyc02g062020.2.1	Tomato	plastid	68.72	73.6
TraesCS3D01G161900.1	Wheat	cytosol	75.83	73.39
Solyc02g077400.2.1	Tomato	cytosol, plastid	68.25	73.1
TraesCS3A01G154600.1	Wheat	cytosol	75.83	72.73
TraesCS3B01G180900.1	Wheat	cytosol	75.83	72.07
Zm00001d037911_P008	Maize	cytosol	78.67	70.94
Os01t0540300-00	Rice	cytosol	29.86	70.79
Solyc03g114070.2.1	Tomato	cytosol	70.14	70.48
Solyc01g088780.2.1	Tomato	cytosol	67.77	68.75
Solyc03g033420.2.1	Tomato	cytosol	61.61	65.99
Solyc10g055520.1.1	Tomato	cytosol	38.86	51.57
HORVU3Hr1G052560.3	Barley	cytosol	51.18	36.36

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
InterPro:IPR003578	UniProt:K4DBQ8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF127	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	EnsemblPlantsGene:Solyc12g007210.1	EnsemblPlants:Solyc12g007210.1.1	TIGRFAMs:TIGR00231
UniParc:UPI00027693EF	:	:	:	:	:

Description

No Description!

Coordinates

chr12:-:1633954..1635822

Molecular Weight (calculated)

23368.3 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.056

Length

211 amino acids

Sequence
(BLAST)

001: MNVSKFIKCV TVGDGAVGKT CMLICYTNNR FPTDYIPTVF DNFSANVSMD GKIVNLGLWD TAGQEDYSRL RPLSYRCADV FVLAFSLISR ASYENVLKKW
101: MPELRRFAPD VPIVLVGTKL DLRDDNAYLA DHMDSNIITP AQGEELRKQI GAAAYVECSS KTQQNVKAVF DTAIKVVLQP PRRMEVTSKK RHRSTGCSIV
201: RGIVCGGCAA V

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.