Factsheet for HORVU3Hr1G052560.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G161900.1	Wheat	cytosol	45.45	61.93
TraesCS3A01G154600.1	Wheat	cytosol	45.45	61.36
TraesCS3B01G180900.1	Wheat	cytosol	45.12	60.36
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	41.75	57.94
HORVU6Hr1G095230.1	Barley	cytosol	36.36	54.82
EES19253	Sorghum	cytosol	39.73	54.63
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	37.37	52.86
Solyc07g020800.2.1	Tomato	cytosol	37.04	52.38
CDY06854	Canola	cytosol	36.7	52.15
Bra011072.1-P	Field mustard	cytosol	36.36	51.67
AT4G28950.1	Thale cress	cytosol	36.36	51.67
CDY35236	Canola	cytosol	36.36	51.67
KRG90165	Soybean	cytosol	20.88	51.67
PGSC0003DMT400022302	Potato	cytosol	36.36	51.43
Solyc12g007210.1.1	Tomato	cytosol	36.36	51.18
HORVU1Hr1G076880.4	Barley	cytosol	37.04	50.46
Zm00001d037911_P008	Maize	cytosol	39.73	50.43
PGSC0003DMT400000816	Potato	cytosol	35.69	50.24
HORVU6Hr1G076210.5	Barley	cytosol	35.69	49.3
HORVU2Hr1G076740.1	Barley	cytosol	9.43	43.75
HORVU7Hr1G038980.5	Barley	cytosol	35.02	41.6
HORVU3Hr1G050740.1	Barley	cytosol	17.17	39.53
HORVU6Hr1G012690.3	Barley	plastid	34.34	36.04
HORVU3Hr1G050750.1	Barley	cytosol, plasma membrane, plastid	8.42	27.47

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287L276	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:HORVU3Hr1G052560	EnsemblPlants:HORVU3Hr1G052560.3	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF154	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI000B470159
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:382223044..382224925

Molecular Weight (calculated)

34117.4 Da

IEP (calculated)

10.526

GRAVY (calculated)

-0.859

Length

297 amino acids

Sequence
(BLAST)

001: YVAVAVLSLE QQASRLTRGT ETRDSDRERE REREGEAVAD WVWLERRGEE RHERRSGGGD GGEQVHQVRG RGRRRRGQDL HAHLLHLQQV PHRLHPHRVR
101: QLQRQCLRGR EHRQPRPLGH RRSPSLLPPL PIPDAECFSS CNGGPSWVAG QEDYSRLRPL SYRGADVFIL SFSLTSRASY ENVHKKWMPE LRRYAPGIPV
201: LLVGTKLDLR EDRAYLADHA ADSIITTEQG EDLRRQIGAV AYIECSSKTQ RNIKAVFDTA IKAVLQPQRH KEVARKETRT RSSRSVRQYF CGSSCFA

Best Arabidopsis Sequence Match ( AT3G48040.1 )
(BLAST)

001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN

Arabidopsis Description

ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.