Factsheet for TraesCS3A01G154600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G161900.1	Wheat	cytosol	98.64	99.54
TraesCS3B01G180900.1	Wheat	cytosol	99.09	98.2
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	85.0	87.38
EES19253	Sorghum	cytosol	82.73	84.26
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	75.0	78.57
TraesCS1A01G333600.1	Wheat	cytosol	74.55	77.36
Solyc07g020800.2.1	Tomato	cytosol	73.64	77.14
Zm00001d037911_P008	Maize	cytosol	81.82	76.92
PGSC0003DMT400022302	Potato	cytosol	73.18	76.67
AT4G28950.1	Thale cress	cytosol	72.73	76.56
CDY35236	Canola	cytosol	72.27	76.08
CDY06854	Canola	cytosol	72.27	76.08
Bra011072.1-P	Field mustard	cytosol	72.27	76.08
Solyc12g007210.1.1	Tomato	cytosol	72.73	75.83
PGSC0003DMT400000816	Potato	cytosol	71.82	74.88
TraesCS1A01G323900.1	Wheat	cytosol	64.55	72.08
TraesCS6A01G070700.2	Wheat	cytosol	63.64	71.07
TraesCS6A01G309000.2	Wheat	cytosol	67.27	69.48
TraesCS7A01G191400.1	Wheat	cytosol	63.64	65.73
KRG90165	Soybean	cytosol	30.0	55.0
HORVU3Hr1G052560.3	Barley	cytosol	61.36	45.45

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0019899	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF154	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS3A01G154600	EnsemblPlants:TraesCS3A01G154600.1
TIGR:cd04133	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:146394460..146395849

Molecular Weight (calculated)

24227.1 Da

IEP (calculated)

9.216

GRAVY (calculated)

-0.114

Length

220 amino acids

Sequence
(BLAST)

001: MSGGAAAGAA AAVSRFIKCV AVGDGAVGKT CMLICYTCNK FPTDYIPTVF DNFSANVSVD GSIVNLGLWD TAGQEDYSRL RPLSYRGADV FILSFSLTSR
101: ASYENVHKKW MPELRRYAPG IPVLLVGTKL DLREDRAYLA DHAADSIITT EQGEELRRQI GAVAYIECSS KTQRNIKAVF DTAIKAVLQP QRHKEVARKE
201: IRTRSSRSVR RYFCGSVCLA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.