CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037911_P008	Maize	cytosol	96.76	89.32
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	87.5	88.32
TraesCS3D01G161900.1	Wheat	cytosol	83.8	83.03
TraesCS3A01G154600.1	Wheat	cytosol	84.26	82.73
EES18497	Sorghum	cytosol	81.02	82.55
TraesCS3B01G180900.1	Wheat	cytosol	83.8	81.53
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	78.7	80.95
Bra011072.1-P	Field mustard	cytosol	77.31	79.9
CDY35236	Canola	cytosol	77.31	79.9
CDY06854	Canola	cytosol	77.31	79.9
Solyc12g007210.1.1	Tomato	cytosol	77.78	79.62
PGSC0003DMT400022302	Potato	cytosol	77.31	79.52
Solyc07g020800.2.1	Tomato	cytosol	77.31	79.52
AT4G28950.1	Thale cress	cytosol	76.39	78.95
PGSC0003DMT400000816	Potato	cytosol	76.85	78.67
EES06186	Sorghum	cytosol	65.74	72.08
EES05544	Sorghum	cytosol	71.3	71.96
EER88130	Sorghum	cytosol	70.37	70.7
KRG90165	Soybean	cytosol	32.87	59.17
KXG31438	Sorghum	cytosol	53.7	54.98
HORVU3Hr1G052560.3	Barley	cytosol	54.63	39.73

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:8058272	UniProt:C5YV52	EnsemblPlants:EES19253	ProteinID:EES19253
ProteinID:EES19253.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0019899	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420
PANTHER:PTHR24072	PANTHER:PTHR24072:SF154	SMART:SM00173	SMART:SM00174	SMART:SM00175	EnsemblPlantsGene:SORBI_3009G084100
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGRFAMs:TIGR00231	UniParc:UPI0001A88828
RefSeq:XP_002440823.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:13296829..13300815

Molecular Weight (calculated)

23976.9 Da

IEP (calculated)

9.711

GRAVY (calculated)

-0.127

Length

216 amino acids

Sequence
(BLAST)

001: MSAAAASSVT KFIKCVTVGD GAVGKTCMLI CYTCNKFPTD YIPTVFDNFS ANVSVDGSIV NLGLWDTAGQ EDYSRLRPLS YRGADVFILS FSLVSRASYE
101: NVLKKWMPEL RRFSPSVPVV LVGTKLDLRE DRSYLADHSA ASIISTEQGE ELRKQIGAVA YIECSSKTQR NIKAVFDTAI KVVLQPPRRR EVTRKKMKKS
201: SNQSVRRYLC GSACFT

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.