Factsheet for VIT_11s0016g03640.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39320	Soybean	cytosol	94.76	93.87
PGSC0003DMT400022302	Potato	cytosol	93.81	93.81
KRH48356	Soybean	cytosol	93.81	93.81
Solyc07g020800.2.1	Tomato	cytosol	93.33	93.33
AT4G28950.1	Thale cress	cytosol	92.86	93.3
Bra011072.1-P	Field mustard	cytosol	91.43	91.87
CDY06854	Canola	cytosol	91.43	91.87
CDY35236	Canola	cytosol	91.43	91.87
GSMUA_Achr6P26750_001	Banana	cytosol	90.48	90.48
GSMUA_Achr9P06320_001	Banana	cytosol	89.52	89.52
PGSC0003DMT400000816	Potato	cytosol	89.52	89.1
Solyc12g007210.1.1	Tomato	cytosol	89.05	88.63
TraesCS1D01G336200.1	Wheat	cytosol	87.14	86.32
TraesCS1B01G347000.1	Wheat	cytosol	87.14	86.32
TraesCS1A01G333600.1	Wheat	cytosol	87.14	86.32
GSMUA_Achr8P27380_001	Banana	cytosol	85.71	86.12
EES18497	Sorghum	cytosol	86.67	85.85
Os05t0513800-01	Rice	plasma membrane	87.14	85.51
Zm00001d010732_P002	Maize	plasma membrane	85.24	84.43
Zm00001d038688_P002	Maize	cytosol	86.67	83.87
HORVU1Hr1G076880.4	Barley	cytosol	86.67	83.49
VIT_03s0038g02380.t01	Wine grape	cytosol	76.19	80.81
VIT_18s0001g14670.t01	Wine grape	cytosol	74.76	79.7
Os01t0229400-02	Rice	endoplasmic reticulum, plasma membrane	80.95	79.44
EES19253	Sorghum	cytosol	80.95	78.7
VIT_12s0028g02630.t01	Wine grape	cytosol, nucleus, plastid	72.86	78.06
Os01t0540300-00	Rice	cytosol	32.38	76.4
VIT_04s0023g03860.t01	Wine grape	cytosol	70.95	76.02
VIT_17s0000g07890.t01	Wine grape	cytosol	75.71	75.71
TraesCS3D01G161900.1	Wheat	cytosol	78.57	75.69
TraesCS3A01G154600.1	Wheat	cytosol	78.57	75.0
TraesCS3B01G180900.1	Wheat	cytosol	78.1	73.87
VIT_15s0021g01130.t01	Wine grape	cytosol	68.57	72.73
Zm00001d037911_P008	Maize	cytosol	80.0	71.79
VIT_10s0003g00570.t01	Wine grape	cytosol	55.71	68.42
HORVU3Hr1G052560.3	Barley	cytosol	52.86	37.37

Protein Annotations

EntrezGene:100266265	wikigene:100266265	MapMan:27.4.1	Gene3D:3.40.50.300	UniProt:A5ARL1	EMBL:AM433118
ProteinID:CAN73708	ProteinID:CAN73708.1	ProteinID:CBI28044	ProteinID:CBI28044.3	EMBL:FN595756	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EntrezGene:LOC100266265	wikigene:LOC100266265
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	InterPro:Small_GTPase_Rho	TIGR:TC55317	TIGRFAMs:TIGR00231	UniParc:UPI000151F3C1	ArrayExpress:VIT_11s0016g03640
EnsemblPlantsGene:VIT_11s0016g03640	EnsemblPlants:VIT_11s0016g03640.t01	unigene:Vvi.14441	RefSeq:XP_002284205	RefSeq:XP_002284205.1	RefSeq:XP_003633122
RefSeq:XP_003633122.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:+:2972017..2974625

Molecular Weight (calculated)

22982.9 Da

IEP (calculated)

9.603

GRAVY (calculated)

-0.039

Length

210 amino acids

Sequence
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GSIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISR ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLREDKGYLA DHMGSNVITS AQGEELRKQI GAAAYIECSS KTQQNVKAVF DTAIKVVLQP PRRKEVARKK RRRSTGCSIV
201: SIVCGGCAAA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.