Factsheet for Zm00001d038688_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18497	Sorghum	cytosol	94.93	97.17
Zm00001d010732_P002	Maize	plasma membrane	94.47	96.7
TraesCS1B01G347000.1	Wheat	cytosol	90.78	92.92
TraesCS1A01G333600.1	Wheat	cytosol	90.78	92.92
TraesCS1D01G336200.1	Wheat	cytosol	90.78	92.92
HORVU1Hr1G076880.4	Barley	cytosol	89.86	89.45
Os05t0513800-01	Rice	plasma membrane	87.56	88.78
GSMUA_Achr6P26750_001	Banana	cytosol	84.33	87.14
GSMUA_Achr9P06320_001	Banana	cytosol	83.87	86.67
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	83.87	86.67
GSMUA_Achr8P27380_001	Banana	cytosol	82.49	85.65
AT4G28950.1	Thale cress	cytosol	82.03	85.17
CDY35236	Canola	cytosol	81.57	84.69
Bra011072.1-P	Field mustard	cytosol	81.57	84.69
PGSC0003DMT400022302	Potato	cytosol	81.57	84.29
CDY06854	Canola	cytosol	81.11	84.21
Solyc07g020800.2.1	Tomato	cytosol	81.11	83.81
Solyc12g007210.1.1	Tomato	cytosol	81.11	83.41
PGSC0003DMT400000816	Potato	cytosol	80.65	82.94
Zm00001d018573_P002	Maize	mitochondrion	70.97	78.17
Zm00001d015036_P005	Maize	cytosol	70.05	77.16
Zm00001d037911_P008	Maize	cytosol	80.18	74.36
KRG90165	Soybean	cytosol	35.48	64.17
Zm00001d053899_P001	Maize	cytosol	66.36	62.07
Zm00001d052273_P004	Maize	plastid	61.29	61.29
Zm00001d044802_P001	Maize	cytosol	73.73	55.75
Zm00001d018004_P002	Maize	cytosol, peroxisome, plastid	73.27	31.42

Protein Annotations

MapMan:27.4.1	Gene3D:3.40.50.300	EntrezGene:542017	UniProt:A0A1D6M9U6	ProteinID:AQK87570.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF127	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	InterPro:Small_GTPase_Rho
TIGRFAMs:TIGR00231	UniParc:UPI0004DE8FE4	EnsemblPlantsGene:Zm00001d038688	EnsemblPlants:Zm00001d038688_P002	EnsemblPlants:Zm00001d038688_T002	:

Description

Rho-related protein6 Rho-related protein6

Coordinates

chr6:+:162602920..162605148

Molecular Weight (calculated)

23769.7 Da

IEP (calculated)

9.623

GRAVY (calculated)

-0.048

Length

217 amino acids

Sequence
(BLAST)

001: MSVTKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVSVD GSIVNLGLWD TAGQEDYSRL RPLSYRGADV FVLAFSLISR ASYENVLKKW
101: VPELRRFAPN VPVVLVGTKL DLRDHRAYLA DHPGASAVTT AQPLFLQGEE LRKQIGAAAY IECSSKTQQN VKSVFDTAIK VVLQPPRRRE AVPARKKNRR
201: GSGCSIMNLV CGSTCAA

Best Arabidopsis Sequence Match ( AT4G28950.1 )
(BLAST)

001: MSASKFIKCV TVGDGAVGKT CMLICYTSNK FPTDYIPTVF DNFSANVAVD GQIVNLGLWD TAGQEDYSRL RPLSYRGADI FVLAFSLISK ASYENVLKKW
101: MPELRRFAPN VPIVLVGTKL DLRDDKGYLA DHTNVITSTQ GEELRKQIGA AAYIECSSKT QQNVKAVFDT AIKVVLQPPR RKEVPRRRKN HRRSGCSIAS
201: IVCGGCTAA

Arabidopsis Description

ARAC7Rac-like GTP-binding protein ARAC7 [Source:UniProtKB/Swiss-Prot;Acc:O82480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.