Factsheet for VIT_03s0038g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g14670.t01	Wine grape	cytosol	95.96	96.45
VIT_04s0023g03860.t01	Wine grape	cytosol	87.37	88.27
VIT_12s0028g02630.t01	Wine grape	cytosol, nucleus, plastid	87.37	88.27
VIT_15s0021g01130.t01	Wine grape	cytosol	79.8	79.8
VIT_10s0003g00570.t01	Wine grape	cytosol	66.67	77.19
VIT_11s0016g03640.t01	Wine grape	cytosol, nucleus, plasma membrane	80.81	76.19
VIT_17s0000g07890.t01	Wine grape	cytosol	78.79	74.29

Protein Annotations

EntrezGene:100253703	wikigene:100253703	MapMan:27.4.1	Gene3D:3.40.50.300	UniProt:A5AP72	EMBL:AM431253
ProteinID:CAN73627	ProteinID:CAN73627.1	ProteinID:CBI37875	ProteinID:CBI37875.3	EMBL:FN596508	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR003578	EntrezGene:LOC100253703	wikigene:LOC100253703
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51420	PANTHER:PTHR24072	PANTHER:PTHR24072:SF249
SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
InterPro:Small_GTPase_Rho	TIGR:TC54459	TIGRFAMs:TIGR00231	UniParc:UPI000151F02B	ArrayExpress:VIT_03s0038g02380	EnsemblPlantsGene:VIT_03s0038g02380
EnsemblPlants:VIT_03s0038g02380.t01	RefSeq:XP_002278595	RefSeq:XP_002278595.1	RefSeq:XP_002278633	RefSeq:XP_002278633.1	RefSeq:XP_019074477.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:1655966..1660311

Molecular Weight (calculated)

21830.4 Da

IEP (calculated)

9.834

GRAVY (calculated)

-0.116

Length

198 amino acids

Sequence
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CMLISYTSNT FPTDYVPTVF DNFSANVVVD GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLISK ASYENVAKKW
101: IPELRHYAPG VPIILVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKLI GAPAYIECSS KTQQNVKAVF DAAIKVVLQP PKQKKRKKRK AQKACSIL

Best Arabidopsis Sequence Match ( AT4G35020.3 )
(BLAST)

001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVIVD GNTINLGLWD TAGQEDYNRL RPLSYRGADV FLLAFSLVSK ASYENVSKKW
101: VPELRHYAPG VPIILVGTKL DLRDDKQFFA EHPGAVPIST AQGEELKKLI GAPAYIECSA KTQQNVKAVF DAAIKVVLQP PKNKKKKKRK SQKGCSIL

Arabidopsis Description

ARAC3At4g35020 [Source:UniProtKB/TrEMBL;Acc:Q5PNX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.