Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004254 | Potato | cytosol | 98.08 | 98.08 |
| VIT_15s0021g01130.t01 | Wine grape | cytosol | 83.65 | 87.88 |
| CDY71169 | Canola | plastid | 85.1 | 83.89 |
| Bra004857.1-P | Field mustard | plastid | 84.13 | 82.94 |
| CDY48250 | Canola | plastid | 84.13 | 82.16 |
| Solyc01g111560.2.1 | Tomato | cytosol, nucleus, plastid | 76.92 | 80.81 |
| Solyc02g077400.2.1 | Tomato | cytosol, plastid | 76.44 | 80.71 |
| Solyc02g083580.2.1 | Tomato | nucleus | 75.48 | 79.7 |
| AT2G44690.1 | Thale cress | plastid | 78.85 | 78.47 |
| Solyc02g062020.2.1 | Tomato | plastid | 74.04 | 78.17 |
| Solyc03g033420.2.1 | Tomato | cytosol | 67.31 | 71.07 |
| Solyc03g114070.2.1 | Tomato | cytosol | 69.71 | 69.05 |
| Solyc07g020800.2.1 | Tomato | cytosol | 69.23 | 68.57 |
| Solyc12g007210.1.1 | Tomato | cytosol | 68.75 | 67.77 |
| Solyc10g055520.1.1 | Tomato | cytosol | 41.83 | 54.72 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | InterPro:IPR003578 | UniProt:K4AYR8 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF160 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | InterPro:Small_GTPase_Rho | EnsemblPlantsGene:Solyc01g088780.2 | EnsemblPlants:Solyc01g088780.2.1 |
| TIGRFAMs:TIGR00231 | UniParc:UPI0002761B51 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:+:83524888..83528574
Molecular Weight (calculated)
23016.6 Da
IEP (calculated)
9.542
GRAVY (calculated)
-0.240
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSTSASNN ATTTGTKFIK CVTVGDGAVG KTCLLISYTS NTFPTDYVPT VFDNFSANVN VDGKIVNLGL WDTAGQEDYN RLRPLSYRGA DVFLLAFSLI
101: SRPSFENISK KWVPELRHYA PSVPIVLVGT KLDLREDKQF IRDYPGACTI STEQGEELKK QIGAVAYVEC SAKTQQNVKA VFDTAIKVVL QPPKTKKQKR
201: KHKACWIL
101: SRPSFENISK KWVPELRHYA PSVPIVLVGT KLDLREDKQF IRDYPGACTI STEQGEELKK QIGAVAYVEC SAKTQQNVKA VFDTAIKVVL QPPKTKKQKR
201: KHKACWIL
001: MSASMAATST SSATATTFIK CVTVGDGAVG KTCLLISYTS NTFPTDYVPT VFDNFNANVL VDGKTVNLGL WDTAGQEDYN RVRPLSYRGA DVFILAFSLI
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL
101: SRPSFENIAK KWVPELRHYA PTVPIVLVGT KSDLRDNMQF PKNYPGACTI FPEQGQELRK EIGALAYIEC SSKAQMNVKA VFDEAIKVVL HPPSKTKKRK
201: RKIGLCHVL
Arabidopsis Description
ARAC9ROP8 [Source:UniProtKB/TrEMBL;Acc:A0A178VUK9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.