Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G288300.1 | Wheat | cytosol | 96.71 | 96.71 |
| TraesCS6A01G309000.2 | Wheat | cytosol | 96.24 | 96.24 |
| Os02t0742200-01 | Rice | cytosol | 92.02 | 91.59 |
| HORVU6Hr1G076210.5 | Barley | cytosol | 92.02 | 91.16 |
| EES05544 | Sorghum | cytosol | 90.61 | 90.19 |
| Solyc03g114070.2.1 | Tomato | cytosol | 84.98 | 86.19 |
| PGSC0003DMT400063229 | Potato | cytosol | 84.51 | 85.71 |
| VIT_17s0000g07890.t01 | Wine grape | cytosol | 82.63 | 83.81 |
| TraesCS7B01G096200.1 | Wheat | cytosol | 83.1 | 83.1 |
| KRH57035 | Soybean | cytosol | 80.75 | 82.3 |
| GSMUA_Achr3P06090_001 | Banana | cytosol, mitochondrion, plastid | 82.63 | 82.24 |
| Bra035878.1-P | Field mustard | cytosol | 78.4 | 81.46 |
| AT3G48040.1 | Thale cress | cytosol | 78.4 | 80.29 |
| AT5G62880.1 | Thale cress | cytosol | 80.75 | 80.0 |
| Bra010128.1-P | Field mustard | cytosol | 77.93 | 79.81 |
| GSMUA_Achr2P00650_001 | Banana | cytosol | 79.34 | 79.34 |
| CDY30738 | Canola | cytosol | 79.81 | 79.07 |
| CDY00332 | Canola | cytosol | 79.81 | 79.07 |
| Bra029240.1-P | Field mustard | cytosol | 79.81 | 79.07 |
| CDY56740 | Canola | cytosol | 79.81 | 78.7 |
| TraesCS6B01G094700.2 | Wheat | cytosol | 72.77 | 78.68 |
| CDY68200 | Canola | cytosol | 66.67 | 78.45 |
| CDY45748 | Canola | cytosol | 77.93 | 77.93 |
| KRH63489 | Soybean | cytosol | 77.46 | 77.83 |
| Zm00001d052273_P004 | Maize | plastid | 78.87 | 77.42 |
| TraesCS1B01G337200.1 | Wheat | cytosol | 71.36 | 77.16 |
| KRH54429 | Soybean | cytosol | 23.47 | 76.92 |
| KRH54430 | Soybean | cytosol | 52.58 | 76.71 |
| PGSC0003DMT400063227 | Potato | cytosol | 56.81 | 75.62 |
| TraesCS1B01G347000.1 | Wheat | cytosol | 70.89 | 71.23 |
| KRH03338 | Soybean | cytosol, plastid | 80.75 | 67.72 |
| TraesCS3B01G180900.1 | Wheat | cytosol | 67.61 | 64.86 |
| Zm00001d018004_P002 | Maize | cytosol, peroxisome, plastid | 86.85 | 36.56 |
Protein Annotations
| MapMan:27.4.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR003578 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51420 | PANTHER:PTHR24072 | PANTHER:PTHR24072:SF174 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| InterPro:Small_GTPase_Rho | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS6B01G338000 | EnsemblPlants:TraesCS6B01G338000.1 | TIGR:cd04133 | SEG:seg |
Description
No Description!
Coordinates
chr6B:+:595226679..595229895
Molecular Weight (calculated)
23075.1 Da
IEP (calculated)
9.356
GRAVY (calculated)
-0.158
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASRFIK CVTVGDGAVG KTCMLICYTX XXXXXDYIPT VFDNFSANVV ADGTTVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLV SRASYENIMK
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELCK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: MNFGGRKMLC FKS
101: KWIPELQHYA PGVPVVLVGT KLDLREDKHY LLDHPGMIPV TTAQGEELCK QVGALYYIEC SSKTQQNVKA VFDAAIKVVI QPPTKQREKK KKKQRRGCSM
201: MNFGGRKMLC FKS
001: MASSASKFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSVNVV VEGITVNLGL WDTAGQEDYN RLRPLSYRGA DVFVLAFSLI SRASYENVFK
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
101: KWIPELQHFA PGVPIVLVGT KMDLREDRHY LSDHPGLSPV TTSQGEELRK HIGATYYIEC SSKTQQNVKA VFDAAIKVVI KPAVKQKEKK KKQKPRSGCL
201: SNILCGKN
Arabidopsis Description
ARAC8ROP10 [Source:UniProtKB/TrEMBL;Acc:A0A178VHB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.