Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G504600.1
TraesCS2D01G505300.1
TraesCS6A01G309000.2
TraesCS6B01G338000.1
TraesCS6D01G288300.1
TraesCS7A01G191400.1
TraesCS7B01G096200.1
TraesCS7D01G192400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G36910.1 TraesCS2A01G504600.1 AT1G22920.1 21798944
AT4G36910.1 TraesCS2D01G505300.1 AT1G22920.1 21798944
AT4G36910.1 TraesCS6A01G309000.2 AT3G48040.1 21798944
AT4G36910.1 TraesCS6B01G338000.1 AT3G48040.1 21798944
AT4G36910.1 TraesCS6D01G288300.1 AT3G48040.1 21798944
AT4G36910.1 TraesCS7A01G191400.1 AT3G48040.1 21798944
AT4G36910.1 TraesCS7B01G096200.1 AT3G48040.1 21798944
AT4G36910.1 TraesCS7D01G192400.1 AT3G48040.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G288400.1 Wheat plastid 86.96 86.96
GSMUA_Achr7P05420_001 Banana cytosol 53.48 78.85
GSMUA_Achr1P26070_001 Banana cytosol 49.57 72.15
Os08t0313200-01 Rice plasma membrane, plastid 72.61 71.06
Zm00001d050130_P003 Maize plastid 68.26 67.67
Bra011743.1-P Field mustard cytosol 15.22 64.81
CDX75630 Canola cytosol 15.22 64.81
GSMUA_Achr1P15910_001 Banana plastid 59.57 59.83
KRH77032 Soybean plastid 56.96 57.46
PGSC0003DMT400010303 Potato plastid 58.26 57.27
TraesCS5A01G162000.1 Wheat plastid 58.7 57.2
Solyc02g093140.2.1 Tomato plastid 57.83 56.84
KRH28440 Soybean plastid 56.09 56.58
VIT_07s0031g00200.t01 Wine grape plastid 58.26 54.47
Solyc02g064950.2.1 Tomato plastid 55.65 54.24
PGSC0003DMT400065493 Potato plastid 55.22 53.81
AT4G36910.1 Thale cress plastid 55.22 53.81
CDY62227 Canola plastid 53.04 52.36
CDY29539 Canola plastid 53.04 52.36
Bra017810.1-P Field mustard plastid 53.04 52.36
Protein Annotations
EnsemblPlants:TraesCS7A01G295300.1EnsemblPlantsGene:TraesCS7A01G295300Gene3D:3.10.580.10InterPro:CBS_domInterPro:IPR000644PANTHER:PTHR43803
PANTHER:PTHR43803:SF1PFAM:PF00571PFscan:PS51371SignalP:SignalP-noTMSMART:SM00116SUPFAM:SSF54631
MapMan:35.1:::::
Description
No Description!
Coordinates
chr7A:+:384388959..384431492
Molecular Weight (calculated)
24884.1 Da
IEP (calculated)
9.542
GRAVY (calculated)
0.028
Length
230 amino acids
Sequence
(BLAST)
001: MAARLLLLSF DCPAVAGGRR SRLSAMPRMS SGAPLVRPPA SSVGAFAVTA ARGNLPHHTS VVVEGGGVYT VRDFMTKREQ LHVVKPSTSV DEALERLVEH
101: RITGFPVTDD HWNLVGVVSD YDLLALDLIS GNGQAEADIF PEVDSTWKTF HQIQKLLSKT NGKVVSDVMT SAPLVVRETT NLEDAARLLL VTKYRRLPVV
201: DSSGKLVGII TRGNVVRAAL EFKKNVEGSL
Best Arabidopsis Sequence Match ( AT4G36910.1 )
(BLAST)
001: MDAVLYSVPL SFTPLRASSS PSSPYLLLPR FLSVQPCHKF TFSRSFPSKS RIPSASSAAG STLMTNSSSP RSGVYTVGEF MTKKEDLHVV KPTTTVDEAL
101: ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
201: RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
Arabidopsis Description
CBSX1CBS domain-containing protein CBSX1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23193]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.