Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92402 | Sorghum | nucleus | 80.59 | 79.78 |
| Zm00001d028803_P002 | Maize | nucleus | 70.11 | 75.69 |
| Os03t0298700-01 | Rice | cytosol | 54.43 | 53.8 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 50.62 | 49.39 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 50.16 | 49.2 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 49.77 | 49.16 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 39.91 | 43.82 |
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 10.79 | 40.17 |
| Zm00001d032131_P001 | Maize | cytosol, extracellular, plastid | 3.49 | 31.25 |
| Zm00001d025836_P001 | Maize | cytosol | 2.87 | 29.6 |
| Zm00001d025835_P001 | Maize | cytosol | 2.87 | 29.6 |
| Zm00001d022570_P001 | Maize | cytosol | 9.01 | 18.01 |
| CDY69042 | Canola | nucleus | 16.3 | 17.62 |
| CDY39815 | Canola | nucleus | 13.43 | 17.39 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 19.8 | 17.3 |
| Bra005107.1-P | Field mustard | cytosol | 18.56 | 16.74 |
| AT2G38440.1 | Thale cress | cytosol | 18.17 | 16.73 |
| CDX91460 | Canola | cytosol | 17.47 | 16.09 |
| KRH00374 | Soybean | cytosol | 16.54 | 16.04 |
| AT5G01730.1 | Thale cress | cytosol | 14.29 | 15.73 |
| KRH40820 | Soybean | cytosol | 16.46 | 15.59 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 14.67 | 15.13 |
| Zm00001d008906_P003 | Maize | cytosol | 14.91 | 13.76 |
| KRH76068 | Soybean | cytosol | 18.09 | 13.75 |
| KRH65511 | Soybean | cytosol | 17.86 | 13.63 |
| Solyc09g014980.2.1 | Tomato | cytosol | 17.86 | 13.5 |
| Zm00001d027498_P001 | Maize | mitochondrion | 2.64 | 12.41 |
| Zm00001d013353_P001 | Maize | nucleus | 3.34 | 10.46 |
| Zm00001d034616_P001 | Maize | cytosol | 14.6 | 8.78 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | EntrezGene:103639252 | MapMan:20.2.2.2.4 | ProteinID:AQL07318.1 | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030036 | InterPro:IPR003124 |
| UniProt:K7WE98 | PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF10 | InterPro:SCAR/WAVE_fam | UniParc:UPI000220AFF1 |
| InterPro:WH2_dom | EnsemblPlantsGene:Zm00001d047701 | EnsemblPlants:Zm00001d047701_P002 | EnsemblPlants:Zm00001d047701_T002 | SEG:seg | : |
Description
Protein SCAR2
Coordinates
chr9:+:139521822..139527879
Molecular Weight (calculated)
142852.0 Da
IEP (calculated)
4.511
GRAVY (calculated)
-0.793
Length
1288 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLSRHTVGN EYALGGRDLY RAADQHDPED VLDGVAMAGL VGVLRQLGDL AEFAAQVFHG LYDEVMSTSA RGHGLMLRVQ QLEAELPLLE RDSCQRDYLH
0101: VASNRGVDWR SNPRVDQGVV TRGDTPRFIM ESIKQCRGPP KLFMLDKYDI GGEGACLKRY TDPSFFRTDS ACSTLPHEEG IRDERRPPKA MEIRPNLENA
0201: QIFQPPNAAD NVSKLETDPS AEAMDEVPTN RRRLKYRQLN GSVFQSFRPL MLNLYEKPSS EEKLVTGGHS KVRISVNGSP ESDTEERDTM VDTSVNMGKG
0301: KVAVRKNRPV SEEALSRSSD ARSAGSSKGY NSELDVYVDA LTTVDSEAET DSEHRGHGQC TFDRMDSDNR FSNAQNAMTS RNSNFDKKDR PDVPSANRDM
0401: SNQHEEATVS TQNTKPVVVG EHERTSSLEE LLGQEKPASW DHERTSSLEE LLTEDFNAPE SGAREQATEE QSCNGSATGA VSNGTQDITK KTKEVKENSN
0501: IATISFKKIA SKRSRYVGSM AAKVGILPRK LSKKHDPFSD SLRCMAKQLL ELKYDGTKDS DLYDFEANSV GCDVKYQGIS DPPVEIKESD VHKFLPDSSY
0601: DDVGSRKCPQ EEMNHGQEHD APPTDSPHDS VPDEGNGFQD PNMIYLASII TSSSSQEEEG CASTSLHENS SMAVLNHILE HAQEKFEEHL DKDVNEDIHT
0701: EVISENSSGK CEDLKEVSIY SEQVNVEDME ESNKSDVYVL DDETAEYIEE QVVSDGMNSS PVSSKQSDDP CRITPLALAD EDDTVACKVI DSPEVDHITL
0801: SETFTDIDLP NVVNESVISS EHAMPENEQY YFHPETTFGQ DLCLDNNEIV GENGEVPLCS STTVAITPEP TVNREIEHEF HQAVYQEPSN SFNSSKVFGD
0901: PLASDSRDVA PSVISSFDWM LNGAMQQSFN VFPSHPTNGN EQENGSSEDA PPLPPLPPMQ WRTNKIQTCS SPLSAKIGRP PRPKPPAKQQ ESEAAHILQE
1001: NNLHKGLSLQ NEVAQATISS DHETNQLLNM DFHENHHQEG DEYHAQDSNP FPSSEAECLA EIDSVKSENL HPLQLPELIV VPEEAWSEFG NIKFMPEQEG
1101: KLQLNNGLSG LAAQKTSGKP DLFAYYKEKE LSFAGSDKVA NSEENKPNGA VKHMQNLDLP AQQKNDKNDC DRKAEEFSSA LEDESSKSPT HTVPKPPRYP
1201: LLPVTSHDRS MLRKVPTLVQ PSSKLADEKN TLLEQIKNKS FNLKPVLAKR PNVMGGPKTN LQVVAILERA HAIRQAVADD DDDDSWSE
0101: VASNRGVDWR SNPRVDQGVV TRGDTPRFIM ESIKQCRGPP KLFMLDKYDI GGEGACLKRY TDPSFFRTDS ACSTLPHEEG IRDERRPPKA MEIRPNLENA
0201: QIFQPPNAAD NVSKLETDPS AEAMDEVPTN RRRLKYRQLN GSVFQSFRPL MLNLYEKPSS EEKLVTGGHS KVRISVNGSP ESDTEERDTM VDTSVNMGKG
0301: KVAVRKNRPV SEEALSRSSD ARSAGSSKGY NSELDVYVDA LTTVDSEAET DSEHRGHGQC TFDRMDSDNR FSNAQNAMTS RNSNFDKKDR PDVPSANRDM
0401: SNQHEEATVS TQNTKPVVVG EHERTSSLEE LLGQEKPASW DHERTSSLEE LLTEDFNAPE SGAREQATEE QSCNGSATGA VSNGTQDITK KTKEVKENSN
0501: IATISFKKIA SKRSRYVGSM AAKVGILPRK LSKKHDPFSD SLRCMAKQLL ELKYDGTKDS DLYDFEANSV GCDVKYQGIS DPPVEIKESD VHKFLPDSSY
0601: DDVGSRKCPQ EEMNHGQEHD APPTDSPHDS VPDEGNGFQD PNMIYLASII TSSSSQEEEG CASTSLHENS SMAVLNHILE HAQEKFEEHL DKDVNEDIHT
0701: EVISENSSGK CEDLKEVSIY SEQVNVEDME ESNKSDVYVL DDETAEYIEE QVVSDGMNSS PVSSKQSDDP CRITPLALAD EDDTVACKVI DSPEVDHITL
0801: SETFTDIDLP NVVNESVISS EHAMPENEQY YFHPETTFGQ DLCLDNNEIV GENGEVPLCS STTVAITPEP TVNREIEHEF HQAVYQEPSN SFNSSKVFGD
0901: PLASDSRDVA PSVISSFDWM LNGAMQQSFN VFPSHPTNGN EQENGSSEDA PPLPPLPPMQ WRTNKIQTCS SPLSAKIGRP PRPKPPAKQQ ESEAAHILQE
1001: NNLHKGLSLQ NEVAQATISS DHETNQLLNM DFHENHHQEG DEYHAQDSNP FPSSEAECLA EIDSVKSENL HPLQLPELIV VPEEAWSEFG NIKFMPEQEG
1101: KLQLNNGLSG LAAQKTSGKP DLFAYYKEKE LSFAGSDKVA NSEENKPNGA VKHMQNLDLP AQQKNDKNDC DRKAEEFSSA LEDESSKSPT HTVPKPPRYP
1201: LLPVTSHDRS MLRKVPTLVQ PSSKLADEKN TLLEQIKNKS FNLKPVLAKR PNVMGGPKTN LQVVAILERA HAIRQAVADD DDDDSWSE
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.