Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65511 | Soybean | cytosol | 80.81 | 81.1 |
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 12.93 | 63.29 |
| KRH40820 | Soybean | cytosol | 27.8 | 34.63 |
| KRH00374 | Soybean | cytosol | 26.39 | 33.66 |
| CDX91460 | Canola | cytosol | 21.9 | 26.54 |
| Bra005107.1-P | Field mustard | cytosol | 21.25 | 25.21 |
| AT2G38440.1 | Thale cress | cytosol | 20.6 | 24.95 |
| Solyc09g014980.2.1 | Tomato | cytosol | 24.2 | 24.06 |
| CDY69042 | Canola | nucleus | 16.35 | 23.24 |
| Os03t0298700-01 | Rice | cytosol | 14.99 | 19.49 |
| Zm00001d028803_P002 | Maize | nucleus | 13.52 | 19.2 |
| EER92402 | Sorghum | nucleus | 14.7 | 19.14 |
| Zm00001d047701_P002 | Maize | nucleus | 13.75 | 18.09 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 13.75 | 17.87 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 13.16 | 17.85 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 15.47 | 17.77 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 13.75 | 17.75 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 13.52 | 17.35 |
| KRH42863 | Soybean | nucleus | 13.52 | 17.15 |
| KRH58965 | Soybean | nucleus | 7.2 | 12.32 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 8.32 | 12.02 |
Protein Annotations
| Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | EntrezGene:100814240 | MapMan:20.2.2.2.4 | EMBL:ACUP02000554 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_01G128700 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030036 | InterPro:IPR003124 | UniProt:K7K3J6 | ProteinID:KRH76067.1 | EnsemblPlants:KRH76068 | ProteinID:KRH76068 |
| ProteinID:KRH76068.1 | PFscan:PS51082 | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF12 | InterPro:SCAR/WAVE_fam | UniParc:UPI0002336F93 |
| InterPro:WH2_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:44127696..44135686
Molecular Weight (calculated)
186053.0 Da
IEP (calculated)
4.324
GRAVY (calculated)
-0.683
Length
1694 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLSKYRVRN EYSLADPELY RAADKDDPEA LLEAVAMAGL VGLLRQLGDL AEFAAEIFHD LHEEVMATAA RGHGLMARVK QLEAEVPSLE KAFFSQTHHS
0101: SFYTNGGIDW HPNLRFEQNL VTRGDLPRFI MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSFFKME STSSVTATIE VQREKRIRKV KLKKGARLRD
0201: GETPNAVPSH AKLHQLLLEE RIENGYSNPA RRVKLKKRQL NGPAVETRDG KSYMEKFLET PSPDHKMVCE TSIFPLPVKQ TPYDTSEAGI KILEISSISP
0301: VKKSLGNKNT YSSPDENELE LKPFSEMDGG TNEDLVKVKE QISDGVTDKK SSNHLKLPDA AELAINEQKK IEGSLDGHHS DDVTSEVDNY MDALTTMESE
0401: LETDNEYKPK NSFLNIQKAA NTNDKEEHQL QAQFSDSQSF GDSSMSDDSS SFNQDRNEEH IKVEAQSSDS QSTGTSSTLD DNSSFRRDGN GQHREPQAHF
0501: SDSQSVGSSS TSDENFKKDK SYLPHSDSLT TAVENIQSEP ILFTNAKCCE LKVEDAPSNQ LPQNVEFQHT DCERFVMHDD APVHEEEISS DLGQASSDLM
0601: TSGQVLCSNL GSTLPVILPA ATQSDETPSA PAELNLRLDD DNADRTGLVE SISSKPVSLS LTDDAHPVGS SAKTSLDNLD DDDPYIHCDD LLQVLNDLEL
0701: AHGDECSDHS EIKMSQAEPP KENPSKILVN RDIGSPVEDP VSPSMEELNL NSGATLAHDC QDSKDEDCTV TTQLNSETPV SPLSCFTGGL LSDSTHNNTQ
0801: DEPGSAEIEV SSSDLQSKVG EIPKMVHDDE INGSTFSVNP VEDDGHFKRS SPDNHVMVND LVTENVQSDD QAVYSAPSVD SAENDEGVVS CPASSQICSP
0901: SRGLSDLEEP PLSSHSYPME IKSNEVELTQ IAMVTNAEKS ENQSAPLLDV ASSDVVNSSL SNITKLEESL STFADSQKKE IEVDEAVARD SLTELEEQKI
1001: VDQPEIASVD VQLNLNKLVP FDLPDSEICN NIQKSSPREK FQHGAFVDDA EMVPKFLGLD AQQSESLSYG LHDPLQNDRD GFSSPSGNQL EPETDLDLFS
1101: KSQIGEQDAE FPLREEKNFA SEKPQFQQMQ KYQLEQESTN ATSDCVSEIH ADEPSSFYSL PQSSSQENNA AKRVMDPLKP LLPNLFPKAT ENKLDEMPPM
1201: PPLPPMQWRM GKVQHASLAS QREELEVSQV SVQPNRPDKQ SLFGLPTSER ETLYQNPFLP VMALESDKLQ HSSGFAVGVS GHPVAIPFQF PIMVNESKGQ
1301: YNYLLLDSNQ IQNPLLTLPV ASMGMPPQGF IVAPEGEVIQ NSNPCAPIPS AAYAVLGHNS IPPQEKSTQP PHQLMMETTP DDKSLQQSMS NMVSMDRPPH
1401: GHAVASEGEM ELNSNPGPTI PPAECAVSGH DSLSPQEKLT QPPSQLLMEH SSDDKTLLQF VTNVVSMDSS NSHIVSSEGE MEQSSNPDPP TPPVECAVPG
1501: PGHDSISSHE NPTKPPSQLM SETSSEFKTL QQSISNVEGE QGHLPISFMS PPNMESMEPN QSFLPFEGGM EMSLDTSDHT SDLESERTNG KPKNKLPRPR
1601: NPLIDAVAAH DKSKLRKVTE RVMPQIAPKV DERDSLLEQI RTKSFNLKPA VTTRPSIQGP KTNLKFAAIL EKANAIRQAL AGSDEDDDAD WSDS
0101: SFYTNGGIDW HPNLRFEQNL VTRGDLPRFI MDSYEECRGP PRLFLLDKFD VAGAGACLKR YTDPSFFKME STSSVTATIE VQREKRIRKV KLKKGARLRD
0201: GETPNAVPSH AKLHQLLLEE RIENGYSNPA RRVKLKKRQL NGPAVETRDG KSYMEKFLET PSPDHKMVCE TSIFPLPVKQ TPYDTSEAGI KILEISSISP
0301: VKKSLGNKNT YSSPDENELE LKPFSEMDGG TNEDLVKVKE QISDGVTDKK SSNHLKLPDA AELAINEQKK IEGSLDGHHS DDVTSEVDNY MDALTTMESE
0401: LETDNEYKPK NSFLNIQKAA NTNDKEEHQL QAQFSDSQSF GDSSMSDDSS SFNQDRNEEH IKVEAQSSDS QSTGTSSTLD DNSSFRRDGN GQHREPQAHF
0501: SDSQSVGSSS TSDENFKKDK SYLPHSDSLT TAVENIQSEP ILFTNAKCCE LKVEDAPSNQ LPQNVEFQHT DCERFVMHDD APVHEEEISS DLGQASSDLM
0601: TSGQVLCSNL GSTLPVILPA ATQSDETPSA PAELNLRLDD DNADRTGLVE SISSKPVSLS LTDDAHPVGS SAKTSLDNLD DDDPYIHCDD LLQVLNDLEL
0701: AHGDECSDHS EIKMSQAEPP KENPSKILVN RDIGSPVEDP VSPSMEELNL NSGATLAHDC QDSKDEDCTV TTQLNSETPV SPLSCFTGGL LSDSTHNNTQ
0801: DEPGSAEIEV SSSDLQSKVG EIPKMVHDDE INGSTFSVNP VEDDGHFKRS SPDNHVMVND LVTENVQSDD QAVYSAPSVD SAENDEGVVS CPASSQICSP
0901: SRGLSDLEEP PLSSHSYPME IKSNEVELTQ IAMVTNAEKS ENQSAPLLDV ASSDVVNSSL SNITKLEESL STFADSQKKE IEVDEAVARD SLTELEEQKI
1001: VDQPEIASVD VQLNLNKLVP FDLPDSEICN NIQKSSPREK FQHGAFVDDA EMVPKFLGLD AQQSESLSYG LHDPLQNDRD GFSSPSGNQL EPETDLDLFS
1101: KSQIGEQDAE FPLREEKNFA SEKPQFQQMQ KYQLEQESTN ATSDCVSEIH ADEPSSFYSL PQSSSQENNA AKRVMDPLKP LLPNLFPKAT ENKLDEMPPM
1201: PPLPPMQWRM GKVQHASLAS QREELEVSQV SVQPNRPDKQ SLFGLPTSER ETLYQNPFLP VMALESDKLQ HSSGFAVGVS GHPVAIPFQF PIMVNESKGQ
1301: YNYLLLDSNQ IQNPLLTLPV ASMGMPPQGF IVAPEGEVIQ NSNPCAPIPS AAYAVLGHNS IPPQEKSTQP PHQLMMETTP DDKSLQQSMS NMVSMDRPPH
1401: GHAVASEGEM ELNSNPGPTI PPAECAVSGH DSLSPQEKLT QPPSQLLMEH SSDDKTLLQF VTNVVSMDSS NSHIVSSEGE MEQSSNPDPP TPPVECAVPG
1501: PGHDSISSHE NPTKPPSQLM SETSSEFKTL QQSISNVEGE QGHLPISFMS PPNMESMEPN QSFLPFEGGM EMSLDTSDHT SDLESERTNG KPKNKLPRPR
1601: NPLIDAVAAH DKSKLRKVTE RVMPQIAPKV DERDSLLEQI RTKSFNLKPA VTTRPSIQGP KTNLKFAAIL EKANAIRQAL AGSDEDDDAD WSDS
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.