Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0312600-01 | |
| Os02t0742200-01 | |
| Os02t0829900-01 | |
| Os03t0328000-01 | |
| Os06t0234200-03 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92402 | Sorghum | nucleus | 56.64 | 56.73 |
| TraesCS4D01G190300.1 | Wheat | nucleus | 56.18 | 56.13 |
| TraesCS4A01G115200.1 | Wheat | nucleus | 56.25 | 55.83 |
| HORVU4Hr1G055030.24 | Barley | nucleus | 55.33 | 54.62 |
| Zm00001d047701_P002 | Maize | nucleus | 53.8 | 54.43 |
| Zm00001d028803_P002 | Maize | nucleus | 47.58 | 51.97 |
| TraesCS4B01G189000.1 | Wheat | nucleus | 45.89 | 50.98 |
| VIT_08s0058g00780.t01 | Wine grape | cytosol | 10.97 | 41.33 |
| Os07t0691700-01 | Rice | nucleus | 13.74 | 21.13 |
| CDY39815 | Canola | nucleus | 14.04 | 18.39 |
| CDY69042 | Canola | nucleus | 16.5 | 18.04 |
| GSMUA_Achr6P32700_001 | Banana | cytosol | 19.26 | 17.03 |
| Bra005107.1-P | Field mustard | cytosol | 18.57 | 16.95 |
| CDX91460 | Canola | cytosol | 18.11 | 16.88 |
| KRH40820 | Soybean | cytosol | 17.57 | 16.84 |
| AT2G38440.1 | Thale cress | cytosol | 18.04 | 16.8 |
| KRH00374 | Soybean | cytosol | 17.11 | 16.79 |
| Os01t0208600-01 | Rice | cytosol | 16.73 | 16.34 |
| AT5G01730.1 | Thale cress | cytosol | 14.58 | 16.24 |
| KRH76068 | Soybean | cytosol | 19.49 | 14.99 |
| GSMUA_Achr9P04670_001 | Banana | cytosol | 14.2 | 14.81 |
| KRH65511 | Soybean | cytosol | 18.34 | 14.16 |
| Solyc09g014980.2.1 | Tomato | cytosol | 17.88 | 13.67 |
| Os03t0816900-01 | Rice | golgi | 11.36 | 12.81 |
| Os03t0817000-01 | Rice | cytosol | 4.3 | 12.64 |
| Os03t0298800-01 | Rice | nucleus | 0.69 | 3.88 |
Protein Annotations
| EnsemblPlants:Os03t0298700-01 | EnsemblPlantsGene:Os03g0298700 | EntrezGene:4332556 | Gene3D:1.20.5.340 | Gene3D:1.20.58.1570 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030036 | InterPro:SCAR/WAVE_fam | PANTHER:PTHR12902 | PANTHER:PTHR12902:SF10 | ProteinID:BAS83745.1 | RefSeq:XP_015633219.1 |
| SEG:seg | UniParc:UPI0000E1202D | UniProt:A0A0N7KH39 | MapMan:20.2.2.2.4 | : | : |
Description
Suppressor of cAMP Receptor-Like Protein 2, SCAR-like Protein 2, suppressor of cAMP receptor 3Hypothetical conserved gene. (Os03t0298700-01)
Coordinates
chr3:-:10470676..10477048
Molecular Weight (calculated)
143467.0 Da
IEP (calculated)
4.362
GRAVY (calculated)
-0.698
Length
1303 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLSRHEVGN EYSLGGRELY RRANQHDPEA VLDGVAMAGL VGVLRQLGDL AEFAAQVFHG LYDEVMTASA RGHGLMLRVQ QLEAELPLVE KDSCHTDYLY
0101: VASNRGIEWH SNPRLESGVV TKGDTPRFIM DSIKKCHGPP KLFMLDKYDI GGEGACLKRY TDPSFFKTDS ACSSMLEQGI QRERRPLRAM EIRPTLQNSE
0201: IFRPPNAANN DSKLETDLSG EALDEVPTRR RQLKYRQLNG SVFRSFRPQM QNLYGETSPD EKPCSMNHSE VQISFTDSPD TNTEERDIMV DTFSSMDKGK
0301: ENNYVMAGKN RLLSEEALSR SSDARSAGSS KGYNSEVDIY VDALTTMDSE VETDTEHRDH GHRALVPVES SKPCSDVHGA AVSGSISFRN NGSMVPNSSD
0401: VVPAEEENND HHQGYVCVPS PQAKPVAGEH ERSSSLEELF AQEKPVSCEH ERTSSLEELL LGDVHPSGHN MRSSATESNT NGVVSTVESN GTVGTTKKEK
0501: DNPIIAGISF KKTASKKSKY VGSMELIVSK VGILPRKLSK KHDPFSDSLR NMAKQLLELK IDGTKDTELY EFEANGEGCD MKCLEMSHPP IEIMGSATQS
0601: VPPDSPQDNV DSRACRPEEV NQEYDHDVPP SDSPQDSVDG NVFRDIALLR SQEEQQCAGP VTVDNLLDHA PENTQDQIGE HFYREVTEDI HTEVVPENGP
0701: DIGEELEEGS ITEEKVNEED VEESNESDAY TLDENTEYIE EQVVSDDLIS SPISSKQSDD PCQMAPLTLT DADDALAGKN VDNDISEMHI TLSGTITESN
0801: VSTVVVESAT TNDVAVQYNE QCCLHPETSF AQDLTHVSSC EVEGQNEPLP LCSSSMVGTT PDLSVDTEEI HENPILCIDS SSDLFRDALA PDSRDVPLPN
0901: ISSFDWMLNG AMQKSLNVLP AKPPNGILQE NNSSKDTEDA PPPLPPLPPM QWRTTKLQPG PAVLSAKFGR PPRPKPPVKY QENESYSSQD ERNREPEILQ
1001: EASLQNGSTS VTPEKEMVVA KVSNEIQTNI MFGRDSQESH LKGLNEYDVQ ASDSFSTSEF KSVGGVASVE GDNLETSQLS ELIVIPEEAW SELVDIKSIS
1101: GQEKGGKRQL STGVFNCNGM HTTGLSAEKR DDYKIYDQNE KNLLAGKGNA IADSEEKEPN GVTCQDDTKN SDLLVQQEDG QHDSSAGTAR ESSSSFEEEV
1201: AKFSPPRVPT PPKYPLFQVT AHDRSMLKRA PTLVQPSIKL SDENNTILEQ IKNKSFNLKP VLAKRPNMMG APRTNLQVVA ILERANAIRQ AVADDDDEDS
1301: WSD
0101: VASNRGIEWH SNPRLESGVV TKGDTPRFIM DSIKKCHGPP KLFMLDKYDI GGEGACLKRY TDPSFFKTDS ACSSMLEQGI QRERRPLRAM EIRPTLQNSE
0201: IFRPPNAANN DSKLETDLSG EALDEVPTRR RQLKYRQLNG SVFRSFRPQM QNLYGETSPD EKPCSMNHSE VQISFTDSPD TNTEERDIMV DTFSSMDKGK
0301: ENNYVMAGKN RLLSEEALSR SSDARSAGSS KGYNSEVDIY VDALTTMDSE VETDTEHRDH GHRALVPVES SKPCSDVHGA AVSGSISFRN NGSMVPNSSD
0401: VVPAEEENND HHQGYVCVPS PQAKPVAGEH ERSSSLEELF AQEKPVSCEH ERTSSLEELL LGDVHPSGHN MRSSATESNT NGVVSTVESN GTVGTTKKEK
0501: DNPIIAGISF KKTASKKSKY VGSMELIVSK VGILPRKLSK KHDPFSDSLR NMAKQLLELK IDGTKDTELY EFEANGEGCD MKCLEMSHPP IEIMGSATQS
0601: VPPDSPQDNV DSRACRPEEV NQEYDHDVPP SDSPQDSVDG NVFRDIALLR SQEEQQCAGP VTVDNLLDHA PENTQDQIGE HFYREVTEDI HTEVVPENGP
0701: DIGEELEEGS ITEEKVNEED VEESNESDAY TLDENTEYIE EQVVSDDLIS SPISSKQSDD PCQMAPLTLT DADDALAGKN VDNDISEMHI TLSGTITESN
0801: VSTVVVESAT TNDVAVQYNE QCCLHPETSF AQDLTHVSSC EVEGQNEPLP LCSSSMVGTT PDLSVDTEEI HENPILCIDS SSDLFRDALA PDSRDVPLPN
0901: ISSFDWMLNG AMQKSLNVLP AKPPNGILQE NNSSKDTEDA PPPLPPLPPM QWRTTKLQPG PAVLSAKFGR PPRPKPPVKY QENESYSSQD ERNREPEILQ
1001: EASLQNGSTS VTPEKEMVVA KVSNEIQTNI MFGRDSQESH LKGLNEYDVQ ASDSFSTSEF KSVGGVASVE GDNLETSQLS ELIVIPEEAW SELVDIKSIS
1101: GQEKGGKRQL STGVFNCNGM HTTGLSAEKR DDYKIYDQNE KNLLAGKGNA IADSEEKEPN GVTCQDDTKN SDLLVQQEDG QHDSSAGTAR ESSSSFEEEV
1201: AKFSPPRVPT PPKYPLFQVT AHDRSMLKRA PTLVQPSIKL SDENNTILEQ IKNKSFNLKP VLAKRPNMMG APRTNLQVVA ILERANAIRQ AVADDDDEDS
1301: WSD
0001: MPLTRYQSRN EYGLADPDLY QAADKDDPEA LLEGVAMAGL VGILRQLGDL AEFAAEMFHD LHEEVMATAS RSHGLMARVQ QLEAEFPSIE KALLCQTDHS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
0101: PFFSNKGVEW HPNLQLEQSV VTSGDLPRCV MDSYEECRGP PRLFLLDKFD ISGAGACLKR YTDPSFVRLE TSSYEESWDD IQREKKSQKA KRRASQWRNG
0201: GTPENALSSH AKLHELFLEE HLEAHHSDPA RVVKLKTRKL DGCSLISKSG ESYMEKFVQT RVDSKISYEI ITQNPGLLTW NMDSARDVVT DIPEISMVGA
0301: MDKSHGGSRA EVSFPSEQEN VANVNMNGGF IEKDIETVPE STYNEVRGTT ITQDSQTVLN GKPGFFQQRS YSEDLTSEAD NYVDAPATME SETETDDECR
0401: PKSRSDTLKD GNHHIYSDAV EERMEDPPQF SFSHSNGNTP VSENGRSSFG KKSTSYSYSD TASISIDDQS DGEKLSGCLP STSSFKSELV DSMSHVTPEA
0501: NKVSHDLNVQ ESVSSSNVDG QTSLSSNGTC SSPRPVSQND QSCSLTVQSL ASEVVETSPE LVRLDLMKGG NDGRKVDPFD SSKSCASFDA KNSDLPSETS
0601: SISSTSEGSR CDSTIEKNCM VASNLVNSGT SPQAFVDSQT GKQLPIADTD FETNSIVACS EVLANSGSDP EERDGRCLTG KLVPCSAGVG MEVSPDTPSK
0701: VCGPSSADGI HLKDTLDDET DCVSVTNVVV DVDSKNSVAD VGSQSSVADI DSQSSVAEIS DEHSCAFGNT ADVSVSESHE DTLENGMSVP SDFNSGVEKL
0801: AGDASPTCSK CDDHISHEGF HDLSGLDNAT TDIVPNVELD VSDNDNDTSS GGVNHAVSLS STRGKGSLPW ISTNTYQSSS DAGEIFHDTV VESDGTLLED
0901: NNPESEIKMH KSPLEVSSEG LSTEPDNKDV ESIESTSPKP SLDQRNRDTE TKSPGESILD DNCIDSTQVY NLNLLESEAI DQAVREQTSY ASHEVADEEL
1001: LQSNVFRGLE FEPQSAGLEF APQSAGIELN RPKQELNLDP TFPSFGFIPE TIPPNPEDMP PLPPMQWLIG KVPHSFPTFM GESVETSSSA LSAAPPIGSS
1101: LNVQIGSPPS ELSVSLGSDE SERLPGGFVH NASEKPLQSS IQFPTMSTDL NSQYDSSELP TIPYQECIED FGSEENNLLA DHAAQNHELV YSQASSLQLP
1201: QVKHEDFKDD ADVHESQSSS DDHHCPETKS LTPTQSTKVE DKGHSVPDAS NAETAESSNT SVQKINPVSV GDAMWPVSCF SVAPTLDTYK TEVVPTVRLP
1301: RPRSPLVDAV AAHDRRKMKK VSEMVHPPIK SKQDDKDSLL AQIRNKSVNL KPAVTTRPSI QTGPRTDLRV AAILEKANTI RMAMAGSDED EDSDSWSDS
Arabidopsis Description
SCAR2Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.