Factsheet for Os02t0829900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0208600-01
Os02t0596900-01
Os02t0829900-01
Os03t0298700-01
Os04t0379800-01
Os08t0128300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22640.1	Os02t0596900-01	AT1G13180.1	17267444
AT2G22640.1	Os08t0128300-01	AT1G13180.1	17267444
AT2G22640.1	Os01t0208600-01	AT1G29170.1	15534215
AT2G22640.1	Os01t0208600-01	AT1G29170.1	17267444
AT2G22640.1	Os02t0829900-01	AT2G22640.1	17267444
AT2G22640.1	Os02t0829900-01	AT2G22640.1	21798944
AT2G22640.1	Os02t0829900-01	AT2G22640.1	25262777
AT2G22640.1	Os03t0298700-01	AT2G38440.1	16043432
AT2G22640.1	Os03t0298700-01	AT2G38440.1	17267444
AT2G22640.1	Os04t0379800-01	AT3G23910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07816	Sorghum	cytosol	94.19	96.43
TraesCS2D01G204600.1	Wheat	cytosol	95.35	93.18
TraesCS2B01G224200.1	Wheat	cytosol	95.35	93.18
TraesCS2A01G196600.1	Wheat	cytosol	95.35	93.18
GSMUA_Achr4P11860_001	Banana	cytosol	87.21	89.29
GSMUA_Achr9P23800_001	Banana	cytosol	83.72	85.71
PGSC0003DMT400043032	Potato	cytosol	80.23	81.18
AT2G22640.1	Thale cress	cytosol	77.91	78.82
CDY25614	Canola	cytosol	77.91	77.91
CDX89497	Canola	cytosol	77.91	77.91
Bra030221.1-P	Field mustard	cytosol	77.91	77.91
KRH74448	Soybean	cytosol	75.58	76.47
CDY13739	Canola	cytosol	70.93	76.25
KRH39504	Soybean	cytosol	74.42	75.29
Bra039922.1-P	Field mustard	cytosol	44.19	74.51
Solyc03g043720.2.1	Tomato	cytosol	80.23	72.63
VIT_00s0211g00050.t01	Wine grape	cytosol	38.37	61.11
HORVU2Hr1G062760.2	Barley	cytosol	51.16	50.57

Protein Annotations

Gene3D:1.20.5.110	MapMan:20.2.2.2.3	EntrezGene:4331242	EMBL:AY224582	ProteinID:BAD22945.1	ProteinID:BAF10524.1
ProteinID:BAS81734.1	InterPro:BRICK1	ncoils:Coil	GO:GO:0000902	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005886	GO:GO:0007015	GO:GO:0008064	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987
GO:GO:0010090	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154	GO:GO:0031209	GO:GO:0042802
GO:GO:0044877	GO:GO:0048870	GO:GO:0051259	GO:GO:0071944	EnsemblPlantsGene:Os02g0829900	EnsemblPlants:Os02t0829900-01
PFAM:PD593487	PANTHER:PTHR33668	UniProt:Q84VA7	UniParc:UPI000005F92C	RefSeq:XP_015625255.1	:

Description

Similar to BRICK1. (Os02t0829900-01)

Coordinates

chr2:-:35679730..35681439

Molecular Weight (calculated)

9576.5 Da

IEP (calculated)

7.553

GRAVY (calculated)

-0.120

Length

86 amino acids

Sequence
(BLAST)

1: MARAGGHGMG NPVNVGIAVQ ADWENREFIS NISLNVRRLF DFLLRFEATT KSKLASLNEK LDILERKLEV LEVQVSSATT NPSVFN

Best Arabidopsis Sequence Match ( AT2G22640.1 )
(BLAST)

1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT

Arabidopsis Description

BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.