Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89497 | Canola | cytosol | 100.0 | 98.84 |
| CDY25614 | Canola | cytosol | 100.0 | 98.84 |
| Bra030221.1-P | Field mustard | cytosol | 100.0 | 98.84 |
| CDY13739 | Canola | cytosol | 88.24 | 93.75 |
| Bra039922.1-P | Field mustard | cytosol | 52.94 | 88.24 |
| PGSC0003DMT400043032 | Potato | cytosol | 87.06 | 87.06 |
| KRH74448 | Soybean | cytosol | 85.88 | 85.88 |
| KRH39504 | Soybean | cytosol | 84.71 | 84.71 |
| GSMUA_Achr4P11860_001 | Banana | cytosol | 81.18 | 82.14 |
| Os02t0829900-01 | Rice | cytosol | 78.82 | 77.91 |
| Solyc03g043720.2.1 | Tomato | cytosol | 87.06 | 77.89 |
| GSMUA_Achr9P23800_001 | Banana | cytosol | 75.29 | 76.19 |
| EES07816 | Sorghum | cytosol | 75.29 | 76.19 |
| TraesCS2A01G196600.1 | Wheat | cytosol | 78.82 | 76.14 |
| TraesCS2B01G224200.1 | Wheat | cytosol | 78.82 | 76.14 |
| TraesCS2D01G204600.1 | Wheat | cytosol | 78.82 | 76.14 |
| VIT_00s0211g00050.t01 | Wine grape | cytosol | 45.88 | 72.22 |
| HORVU2Hr1G062760.2 | Barley | cytosol | 42.35 | 41.38 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:20.2.2.2.3 | EntrezGene:816795 | UniProt:A0A178VTW7 | ProteinID:AAD15572.1 | ProteinID:AEC07332.1 |
| EMBL:AF370530 | ArrayExpress:AT2G22640 | EnsemblPlantsGene:AT2G22640 | RefSeq:AT2G22640 | TAIR:AT2G22640 | RefSeq:AT2G22640-TAIR-G |
| EnsemblPlants:AT2G22640.1 | TAIR:AT2G22640.1 | EMBL:AY085644 | InterPro:BRICK1 | EMBL:BT000017 | ncoils:Coil |
| GO:GO:0000902 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005886 | GO:GO:0007015 | GO:GO:0008150 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010090 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030041 |
| GO:GO:0030154 | GO:GO:0031209 | GO:GO:0032403 | GO:GO:0042802 | GO:GO:0044877 | GO:GO:0045010 |
| GO:GO:0048870 | GO:GO:0051259 | GO:GO:0071944 | Symbol:HSPC300 | RefSeq:NP_179849.2 | ProteinID:OAP08821.1 |
| PFAM:PD593487 | PO:PO:0000003 | PO:PO:0000293 | PANTHER:PTHR33668 | UniProt:Q94JY4 | UniParc:UPI00000AC5A9 |
| SEG:seg | : | : | : | : | : |
Description
BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
Coordinates
chr2:+:9622997..9624335
Molecular Weight (calculated)
9481.4 Da
IEP (calculated)
5.827
GRAVY (calculated)
0.022
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.