Factsheet for Bra030221.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005107.1-P
Bra009748.1-P
Bra010847.1-P
Bra016738.1-P
Bra017996.1-P
Bra019815.1-P
Bra030221.1-P
Bra039922.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22640.1	Bra016738.1-P	AT1G13180.1	17267444
AT2G22640.1	Bra019815.1-P	AT1G13180.1	17267444
AT2G22640.1	Bra010847.1-P	AT1G29170.1	15534215
AT2G22640.1	Bra010847.1-P	AT1G29170.1	17267444
AT2G22640.1	Bra030221.1-P	AT2G22640.1	17267444
AT2G22640.1	Bra039922.1-P	AT2G22640.1	17267444
AT2G22640.1	Bra030221.1-P	AT2G22640.1	21798944
AT2G22640.1	Bra039922.1-P	AT2G22640.1	21798944
AT2G22640.1	Bra030221.1-P	AT2G22640.1	25262777
AT2G22640.1	Bra039922.1-P	AT2G22640.1	25262777
AT2G22640.1	Bra005107.1-P	AT2G38440.1	16043432
AT2G22640.1	Bra005107.1-P	AT2G38440.1	17267444
AT2G22640.1	Bra017996.1-P	AT3G49290.1	17267444
AT2G22640.1	Bra009748.1-P	AT5G24310.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89497	Canola	cytosol	100.0	100.0
CDY25614	Canola	cytosol	100.0	100.0
AT2G22640.1	Thale cress	cytosol	98.84	100.0
Bra039922.1-P	Field mustard	cytosol	53.49	90.2
PGSC0003DMT400043032	Potato	cytosol	86.05	87.06
KRH74448	Soybean	cytosol	84.88	85.88
KRH39504	Soybean	cytosol	83.72	84.71
GSMUA_Achr4P11860_001	Banana	cytosol	80.23	82.14
Os02t0829900-01	Rice	cytosol	77.91	77.91
Solyc03g043720.2.1	Tomato	cytosol	86.05	77.89
TraesCS2A01G196600.1	Wheat	cytosol	79.07	77.27
TraesCS2B01G224200.1	Wheat	cytosol	79.07	77.27
TraesCS2D01G204600.1	Wheat	cytosol	79.07	77.27
GSMUA_Achr9P23800_001	Banana	cytosol	74.42	76.19
EES07816	Sorghum	cytosol	74.42	76.19
VIT_00s0211g00050.t01	Wine grape	cytosol	45.35	72.22
HORVU2Hr1G062760.2	Barley	cytosol	43.02	42.53

Protein Annotations

Gene3D:1.20.5.110	MapMan:20.2.2.2.3	InterPro:BRICK1	EnsemblPlantsGene:Bra030221	EnsemblPlants:Bra030221.1	EnsemblPlants:Bra030221.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0007015	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0031209	GO:GO:0032403	GO:GO:0044877	UniProt:M4EN51	PFAM:PD593487	PANTHER:PTHR33668
UniParc:UPI0002544213	SEG:seg	:	:	:	:

Description

AT2G22640 (E=5e-029) HSPC300, BRK1 | BRK1 (BRICK1)

Coordinates

chrA04:+:9871206..9871735

Molecular Weight (calculated)

9538.5 Da

IEP (calculated)

5.827

GRAVY (calculated)

0.017

Length

86 amino acids

Sequence
(BLAST)

1: MAKAGGGITN AVNVGIAVQA DWENREFISH ISLNVRRLFE FLVQFESTTK SKLASLNEKL DLLERRLEML EVQVSTATAN PSLFAT

Best Arabidopsis Sequence Match ( AT2G22640.1 )
(BLAST)

1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT

Arabidopsis Description

BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.