Factsheet for HORVU2Hr1G062760.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G062760.2
HORVU3Hr1G029210.3
HORVU4Hr1G055030.24
HORVU6Hr1G053910.4
HORVU7Hr1G074460.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22640.1	HORVU6Hr1G053910.4	AT1G13180.1	17267444
AT2G22640.1	HORVU7Hr1G074460.5	AT1G13180.1	17267444
AT2G22640.1	HORVU3Hr1G029210.3	AT1G29170.1	15534215
AT2G22640.1	HORVU3Hr1G029210.3	AT1G29170.1	17267444
AT2G22640.1	HORVU2Hr1G062760.2	AT2G22640.1	17267444
AT2G22640.1	HORVU2Hr1G062760.2	AT2G22640.1	21798944
AT2G22640.1	HORVU2Hr1G062760.2	AT2G22640.1	25262777
AT2G22640.1	HORVU4Hr1G055030.24	AT2G38440.1	16043432
AT2G22640.1	HORVU4Hr1G055030.24	AT2G38440.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039922.1-P	Field mustard	cytosol	35.63	60.78
VIT_00s0211g00050.t01	Wine grape	cytosol	36.78	59.26
TraesCS2D01G204600.1	Wheat	cytosol	55.17	54.55
TraesCS2B01G224200.1	Wheat	cytosol	55.17	54.55
TraesCS2A01G196600.1	Wheat	cytosol	55.17	54.55
Os02t0829900-01	Rice	cytosol	50.57	51.16
EES07816	Sorghum	cytosol	47.13	48.81
GSMUA_Achr4P11860_001	Banana	cytosol	47.13	48.81
GSMUA_Achr9P23800_001	Banana	cytosol	45.98	47.62
CDY13739	Canola	cytosol	43.68	47.5
PGSC0003DMT400043032	Potato	cytosol	43.68	44.71
Bra030221.1-P	Field mustard	cytosol	42.53	43.02
CDY25614	Canola	cytosol	42.53	43.02
CDX89497	Canola	cytosol	42.53	43.02
AT2G22640.1	Thale cress	cytosol	41.38	42.35
KRH74448	Soybean	cytosol	40.23	41.18
Solyc03g043720.2.1	Tomato	cytosol	43.68	40.0
KRH39504	Soybean	cytosol	39.08	40.0

Protein Annotations

Gene3D:1.20.5.110	MapMan:20.2.2.2.3	UniProt:A0A287I6S4	InterPro:BRICK1	GO:GO:0000902	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005886	GO:GO:0007015	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090
GO:GO:0016020	GO:GO:0016043	GO:GO:0030154	GO:GO:0031209	GO:GO:0042802	GO:GO:0044877
GO:GO:0051259	GO:GO:0071944	EnsemblPlantsGene:HORVU2Hr1G062760	EnsemblPlants:HORVU2Hr1G062760.2	PFAM:PD593487	PANTHER:PTHR33668
UniParc:UPI000B46786E	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:423054385..423054728

Molecular Weight (calculated)

6859.2 Da

IEP (calculated)

4.467

GRAVY (calculated)

-0.014

Length

87 amino acids

Sequence
(BLAST)

1: MARAGQGGGM GSAVNVGIAV QADWENREFI SNISLNVRRL FDFLLRFDDL DWIGLDLTPY RXXXXXXXXX XXXXXXXXXX XXXXXXX

Best Arabidopsis Sequence Match ( AT2G22640.1 )
(BLAST)

1: MAKAGGITNA VNVGIAVQAD WENREFISHI SLNVRRLFEF LVQFESTTKS KLASLNEKLD LLERRLEMLE VQVSTATANP SLFAT

Arabidopsis Description

BRK1Protein BRICK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94JY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.